Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RNU6-1042P-201ENST00000384204 107 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 RNU6-821P-201ENST00000390995 107 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.49□□□□□ -1.69
SUMO3P55854 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.49□□□□□ -1.69
SUMO3P55854 AC127526.1-201ENST00000417526 366 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 RPL36AP36-201ENST00000418616 301 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 AC006548.1-201ENST00000427470 102 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 BX890604.2-201ENST00000427883 474 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.49□□□□□ -1.69
SUMO3P55854 VN1R54P-201ENST00000435210 1049 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.49□□□□□ -1.69
SUMO3P55854 Z95327.1-201ENST00000446082 482 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.49□□□□□ -1.69
SUMO3P55854 PPIAP3-201ENST00000450588 505 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.49□□□□□ -1.69
SUMO3P55854 AL353691.1-201ENST00000451332 387 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 AC009963.2-201ENST00000453431 138 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 SBDSP1-204ENST00000453858 737 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 MTCYBP1-201ENST00000454315 1119 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 Z82190.1-201ENST00000454534 490 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.49□□□□□ -1.69
SUMO3P55854 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SUMO3P55854 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.49□□□□□ -1.69
SUMO3P55854 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SUMO3P55854 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.49□□□□□ -1.69
SUMO3P55854 RNU6-720P-201ENST00000516363 108 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.49□□□□□ -1.69
SUMO3P55854 MIR4528-201ENST00000577763 90 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 AL669831.4-202ENST00000590817 238 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.49□□□□□ -1.69
SUMO3P55854 AL359999.1-201ENST00000604513 294 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 AC004853.1-201ENST00000604902 698 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 CR381572.1-201ENST00000625098 102 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.49□□□□□ -1.69
SUMO3P55854 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.49□□□□□ -1.69
SUMO3P55854 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SUMO3P55854 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SUMO3P55854 AC009951.1-201ENST00000623674 2614 ntBASIC4.49□□□□□ -1.69
SUMO3P55854 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
SUMO3P55854 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SUMO3P55854 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SUMO3P55854 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SUMO3P55854 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.48□□□□□ -1.69
SUMO3P55854 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SUMO3P55854 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.48□□□□□ -1.69
SUMO3P55854 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.48□□□□□ -1.69
SUMO3P55854 AC073136.1-201ENST00000449426 2884 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.48□□□□□ -1.69
SUMO3P55854 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SUMO3P55854 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
SUMO3P55854 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SUMO3P55854 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.48□□□□□ -1.69
SUMO3P55854 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SUMO3P55854 RNU6-989P-201ENST00000362756 107 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 RNU6-1207P-201ENST00000384343 107 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 Y_RNA.493-201ENST00000384422 102 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 SNORA70-201ENST00000384436 135 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SUMO3P55854 AL080315.1-201ENST00000406055 466 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.48□□□□□ -1.69
SUMO3P55854 DPPA2P3-201ENST00000411853 655 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SUMO3P55854 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.48□□□□□ -1.69
SUMO3P55854 AIMP1P1-201ENST00000418670 937 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC104837.2-201ENST00000427236 424 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.48□□□□□ -1.69
SUMO3P55854 CKS1BP5-201ENST00000434172 273 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 RPL7P11-201ENST00000437586 658 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 PRPF38AP2-201ENST00000438179 851 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AL031667.1-201ENST00000440222 725 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.48□□□□□ -1.69
SUMO3P55854 ELOCP30-201ENST00000447108 299 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 BTF3P6-201ENST00000448054 499 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.48□□□□□ -1.69
SUMO3P55854 AP1S2P1-201ENST00000457344 379 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 TPT1P7-201ENST00000458300 517 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 RN7SL214P-201ENST00000487317 265 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.48□□□□□ -1.69
SUMO3P55854 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SUMO3P55854 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.48□□□□□ -1.69
SUMO3P55854 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.48□□□□□ -1.69
SUMO3P55854 RNU4-60P-201ENST00000517239 135 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AF186190.1-201ENST00000517470 480 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC027308.1-201ENST00000517993 110 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.48□□□□□ -1.69
SUMO3P55854 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.48□□□□□ -1.69
SUMO3P55854 AP000676.2-201ENST00000529711 301 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.48□□□□□ -1.69
SUMO3P55854 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.48□□□□□ -1.69
SUMO3P55854 PDCD5P1-201ENST00000543528 309 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 EDDM3DP-201ENST00000554692 434 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 HMGB3P26-201ENST00000560051 582 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC107954.1-201ENST00000565906 727 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC007599.1-201ENST00000568688 1174 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 MTND1P15-201ENST00000579262 949 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.48□□□□□ -1.69
SUMO3P55854 AC011487.3-201ENST00000593607 453 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC091805.2-201ENST00000603848 235 ntBASIC4.48□□□□□ -1.69
SUMO3P55854 AC112230.1-201ENST00000604342 547 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms