Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU6-1231P-201ENST00000517185 103 ntBASIC3.61□□□□□ -1.83
CDH4P55283 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH4P55283 AP004242.1-201ENST00000533701 349 ntBASIC3.61□□□□□ -1.83
CDH4P55283 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH4P55283 CCNG2P1-201ENST00000549521 1000 ntBASIC3.61□□□□□ -1.83
CDH4P55283 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH4P55283 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH4P55283 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH4P55283 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH4P55283 AC007687.1-201ENST00000602704 304 ntBASIC3.61□□□□□ -1.83
CDH4P55283 AC092628.2-201ENST00000622492 339 ntBASIC3.61□□□□□ -1.83
CDH4P55283 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH4P55283 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH4P55283 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH4P55283 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH4P55283 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH4P55283 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH4P55283 AC011978.2-201ENST00000569835 2054 ntBASIC3.61□□□□□ -1.83
CDH4P55283 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH4P55283 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH4P55283 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDH4P55283 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH4P55283 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH4P55283 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH4P55283 MTCO1P24-201ENST00000515438 1558 ntBASIC3.6□□□□□ -1.83
CDH4P55283 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH4P55283 AC107081.3-201ENST00000612715 2034 ntBASIC3.6□□□□□ -1.83
CDH4P55283 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH4P55283 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CDH4P55283 MIR7-3-201ENST00000384898 110 ntBASIC3.6□□□□□ -1.83
CDH4P55283 UBE2V1P15-201ENST00000407776 448 ntBASIC3.6□□□□□ -1.83
CDH4P55283 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH4P55283 AC245052.5-201ENST00000416320 649 ntBASIC3.6□□□□□ -1.83
CDH4P55283 BX842559.1-201ENST00000419615 532 ntBASIC3.6□□□□□ -1.83
CDH4P55283 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH4P55283 ETF1P3-201ENST00000430422 1160 ntBASIC3.6□□□□□ -1.83
CDH4P55283 AC074367.1-201ENST00000438685 1125 ntBASIC3.6□□□□□ -1.83
CDH4P55283 MTCO3P43-201ENST00000440974 771 ntBASIC3.6□□□□□ -1.83
CDH4P55283 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH4P55283 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
CDH4P55283 AL358232.1-201ENST00000448030 501 ntBASIC3.6□□□□□ -1.83
CDH4P55283 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH4P55283 RN7SL330P-201ENST00000469709 307 ntBASIC3.6□□□□□ -1.83
CDH4P55283 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.6□□□□□ -1.83
CDH4P55283 RN7SL293P-201ENST00000481765 281 ntBASIC3.6□□□□□ -1.83
CDH4P55283 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH4P55283 SETP14-201ENST00000497538 873 ntBASIC3.6□□□□□ -1.83
CDH4P55283 AC078918.1-201ENST00000498515 228 ntBASIC3.6□□□□□ -1.83
CDH4P55283 SLC25A15P5-201ENST00000508033 253 ntBASIC3.6□□□□□ -1.83
CDH4P55283 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH4P55283 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH4P55283 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.6□□□□□ -1.83
CDH4P55283 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CDH4P55283 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH4P55283 MTND5P21-201ENST00000531961 522 ntBASIC3.6□□□□□ -1.83
CDH4P55283 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH4P55283 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH4P55283 ATP5F1P7-201ENST00000567330 760 ntBASIC3.6□□□□□ -1.83
CDH4P55283 AC053481.3-201ENST00000577881 843 ntBASIC3.6□□□□□ -1.83
CDH4P55283 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH4P55283 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH4P55283 AC008687.2-201ENST00000597865 520 ntBASIC3.6□□□□□ -1.83
CDH4P55283 AC079880.2-201ENST00000603790 1213 ntBASIC3.6□□□□□ -1.83
CDH4P55283 Z82195.1-201ENST00000604558 398 ntBASIC3.6□□□□□ -1.83
CDH4P55283 AP003400.6-201ENST00000624698 740 ntBASIC3.6□□□□□ -1.83
CDH4P55283 AC092608.3-201ENST00000625017 386 ntBASIC3.6□□□□□ -1.83
CDH4P55283 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH4P55283 OTUD4P1-201ENST00000237841 3067 ntBASIC3.6□□□□□ -1.83
CDH4P55283 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH4P55283 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH4P55283 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH4P55283 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.59□□□□□ -1.83
CDH4P55283 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH4P55283 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
CDH4P55283 RNA5SP235-201ENST00000365411 114 ntBASIC3.59□□□□□ -1.83
CDH4P55283 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH4P55283 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH4P55283 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH4P55283 OSTCP5-201ENST00000425293 453 ntBASIC3.59□□□□□ -1.83
CDH4P55283 RPL36P19-201ENST00000430744 301 ntBASIC3.59□□□□□ -1.83
CDH4P55283 UBE2V1P1-201ENST00000430836 445 ntBASIC3.59□□□□□ -1.83
CDH4P55283 USP9YP31-201ENST00000431405 881 ntBASIC3.59□□□□□ -1.83
CDH4P55283 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH4P55283 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH4P55283 MTCO3P16-201ENST00000454456 754 ntBASIC3.59□□□□□ -1.83
CDH4P55283 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH4P55283 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH4P55283 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH4P55283 AP006245.1-201ENST00000522549 120 ntBASIC3.59□□□□□ -1.83
CDH4P55283 OR5AP1P-201ENST00000529730 940 ntBASIC3.59□□□□□ -1.83
CDH4P55283 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH4P55283 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH4P55283 DUXAP6-201ENST00000553858 601 ntBASIC3.59□□□□□ -1.83
CDH4P55283 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH4P55283 AL121576.1-201ENST00000556055 276 ntBASIC3.59□□□□□ -1.83
CDH4P55283 AL731537.2-201ENST00000561565 951 ntBASIC3.59□□□□□ -1.83
CDH4P55283 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH4P55283 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH4P55283 AC010928.3-201ENST00000587712 541 ntBASIC3.59□□□□□ -1.83
CDH4P55283 AC019176.2-201ENST00000611579 315 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms