Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FNDC3CP-201ENST00000420795 1155 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC244098.2-201ENST00000422068 99 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC011233.1-201ENST00000422812 283 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1H2P55055 DNAJC19P7-201ENST00000428811 344 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 RPL21P91-201ENST00000429231 479 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1H2P55055 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.34□□□□□ -1.71
NR1H2P55055 MTND2P22-201ENST00000444325 1033 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 ARPC3P5-201ENST00000448802 534 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AL133217.1-201ENST00000450980 425 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 TRGVB-201ENST00000453257 471 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1H2P55055 USP9YP10-201ENST00000454868 628 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1H2P55055 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.34□□□□□ -1.71
NR1H2P55055 snoU109.4-201ENST00000458953 143 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AL672167.3-201ENST00000465951 960 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AP000926.1-201ENST00000479573 241 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 RPS26P15-201ENST00000488067 348 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC090453.1-201ENST00000495560 436 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.34□□□□□ -1.71
NR1H2P55055 PARP4P3-201ENST00000510265 317 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 USP9YP5-201ENST00000511770 630 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 MRPS33P3-201ENST00000513456 322 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC104986.1-201ENST00000517978 436 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H2P55055 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1H2P55055 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1H2P55055 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NR1H2P55055 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1H2P55055 AL133457.1-201ENST00000564251 987 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC012182.1-201ENST00000570133 895 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H2P55055 AL512782.1-201ENST00000603093 364 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC124312.4-201ENST00000605533 310 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC018638.7-201ENST00000605836 1114 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AL031666.3-201ENST00000609320 1006 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AL360219.1-201ENST00000610230 366 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC005962.2-201ENST00000611427 652 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC006329.2-201ENST00000611491 394 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AL139418.1-201ENST00000613613 177 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AL138721.1-201ENST00000616756 179 ntBASIC4.34□□□□□ -1.71
NR1H2P55055 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.34□□□□□ -1.71
NR1H2P55055 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NR1H2P55055 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H2P55055 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NR1H2P55055 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
NR1H2P55055 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NR1H2P55055 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.33□□□□□ -1.72
NR1H2P55055 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 AC097714.1-201ENST00000511272 1647 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NR1H2P55055 OR5H2-201ENST00000355273 945 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NR1H2P55055 RNA5SP191-201ENST00000362585 102 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 ATP5F1P3-201ENST00000397213 657 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 RN7SKP177-201ENST00000410567 355 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.33□□□□□ -1.72
NR1H2P55055 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 P2RY10P2-201ENST00000416730 913 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC073335.1-201ENST00000427776 363 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.33□□□□□ -1.72
NR1H2P55055 RPL7P11-201ENST00000437586 658 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 OR1H1P-201ENST00000448731 937 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 TCEA1P1-201ENST00000449716 880 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.33□□□□□ -1.72
NR1H2P55055 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC097493.1-201ENST00000463958 372 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC118465.1-201ENST00000513820 1271 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.33□□□□□ -1.72
NR1H2P55055 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.33□□□□□ -1.72
NR1H2P55055 ELOCP32-201ENST00000548625 324 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H2P55055 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC008088.1-201ENST00000580993 280 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.33□□□□□ -1.72
NR1H2P55055 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC234771.5-201ENST00000600161 514 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 AL391358.1-201ENST00000605342 190 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.33□□□□□ -1.72
NR1H2P55055 AC019206.1-201ENST00000621938 425 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 C2orf27A-204ENST00000623058 969 ntBASIC4.33□□□□□ -1.72
NR1H2P55055 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms