Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CALM1P2-201ENST00000452941 448 ntBASIC3.06□□□□□ -1.92
GTF2A1P52655 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.06□□□□□ -1.92
GTF2A1P52655 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.06□□□□□ -1.92
GTF2A1P52655 OR2A20P-203ENST00000498397 1268 ntBASIC3.06□□□□□ -1.92
GTF2A1P52655 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.06□□□□□ -1.92
GTF2A1P52655 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.06□□□□□ -1.92
GTF2A1P52655 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.06□□□□□ -1.92
GTF2A1P52655 RAB9BP1-201ENST00000519581 626 ntBASIC3.06□□□□□ -1.92
GTF2A1P52655 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.06□□□□□ -1.92
GTF2A1P52655 CR383656.6-201ENST00000550518 394 ntBASIC3.06□□□□□ -1.92
GTF2A1P52655 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.06□□□□□ -1.92
GTF2A1P52655 DUXAP3-201ENST00000603616 594 ntBASIC3.06□□□□□ -1.92
GTF2A1P52655 MIR6875-201ENST00000617506 72 ntBASIC3.06□□□□□ -1.92
GTF2A1P52655 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
GTF2A1P52655 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.05□□□□□ -1.92
GTF2A1P52655 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.05□□□□□ -1.92
GTF2A1P52655 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
GTF2A1P52655 RNA5SP119-201ENST00000362715 117 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 RNA5SP393-201ENST00000363423 117 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
GTF2A1P52655 FO393413.1-201ENST00000402892 195 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 AC073310.1-201ENST00000423226 1033 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 VDAC1P3-201ENST00000434069 851 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.05□□□□□ -1.92
GTF2A1P52655 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.05□□□□□ -1.92
GTF2A1P52655 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.05□□□□□ -1.92
GTF2A1P52655 AC104472.2-201ENST00000469035 601 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 AP000852.1-201ENST00000472460 573 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 RPL23AP55-201ENST00000498163 452 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.05□□□□□ -1.92
GTF2A1P52655 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
GTF2A1P52655 AC025423.2-201ENST00000537570 439 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 OR4U1P-201ENST00000554958 912 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
GTF2A1P52655 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.05□□□□□ -1.92
GTF2A1P52655 AP003117.1-201ENST00000602771 554 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 AC069209.1-201ENST00000619282 651 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.05□□□□□ -1.92
GTF2A1P52655 ZNF271P-202ENST00000465539 1970 ntBASIC3.05□□□□□ -1.92
GTF2A1P52655 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.05□□□□□ -1.92
GTF2A1P52655 NACA3P-201ENST00000359690 648 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.04□□□□□ -1.92
GTF2A1P52655 RPL32P23-201ENST00000397237 405 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.04□□□□□ -1.92
GTF2A1P52655 AC097713.2-201ENST00000430199 356 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.04□□□□□ -1.92
GTF2A1P52655 AC016712.1-201ENST00000431088 378 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 RPS29P6-201ENST00000438196 145 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.04□□□□□ -1.92
GTF2A1P52655 RPS20P21-201ENST00000466859 343 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 DYNLL1P6-201ENST00000503440 264 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 AC026402.1-201ENST00000513642 170 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 RANP9-201ENST00000519957 271 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.04□□□□□ -1.92
GTF2A1P52655 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.04□□□□□ -1.92
GTF2A1P52655 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.04□□□□□ -1.92
GTF2A1P52655 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.04□□□□□ -1.92
GTF2A1P52655 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.04□□□□□ -1.92
GTF2A1P52655 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 AC104237.2-201ENST00000612456 443 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 AC116563.2-201ENST00000624751 535 ntBASIC3.04□□□□□ -1.92
GTF2A1P52655 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
GTF2A1P52655 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
GTF2A1P52655 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
GTF2A1P52655 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GTF2A1P52655 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GTF2A1P52655 RPL9P7-201ENST00000330965 580 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
GTF2A1P52655 SNORD9-201ENST00000362566 104 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
GTF2A1P52655 ANAPC10P1-201ENST00000395991 556 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 RNU6-1077P-201ENST00000410506 102 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 MTCYBP7-201ENST00000419540 1134 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 AC012065.2-201ENST00000421295 375 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 AL031736.2-201ENST00000426573 787 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.03□□□□□ -1.92
GTF2A1P52655 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.03□□□□□ -1.92
GTF2A1P52655 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.03□□□□□ -1.92
GTF2A1P52655 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.03□□□□□ -1.92
GTF2A1P52655 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.03□□□□□ -1.92
GTF2A1P52655 OR7L1P-201ENST00000456181 380 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.03□□□□□ -1.92
GTF2A1P52655 AC111000.2-201ENST00000507775 550 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.03□□□□□ -1.92
GTF2A1P52655 SCARNA13-201ENST00000516672 275 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.03□□□□□ -1.92
GTF2A1P52655 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.03□□□□□ -1.92
GTF2A1P52655 AP000857.1-201ENST00000532151 543 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.03□□□□□ -1.92
GTF2A1P52655 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC3.03□□□□□ -1.92
GTF2A1P52655 AL161637.1-201ENST00000622380 412 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.03□□□□□ -1.92
GTF2A1P52655 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.03□□□□□ -1.92
GTF2A1P52655 AC233263.6-201ENST00000631132 1963 ntBASIC3.03□□□□□ -1.92
GTF2A1P52655 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
GTF2A1P52655 MFSD8-233ENST00000641482 4860 ntBASIC3.02□□□□□ -1.93
GTF2A1P52655 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
GTF2A1P52655 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
GTF2A1P52655 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
GTF2A1P52655 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms