Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.76□□□□□ -1.65
NEK3P51956 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.76□□□□□ -1.65
NEK3P51956 MTCYBP39-201ENST00000437562 491 ntBASIC4.76□□□□□ -1.65
NEK3P51956 SDCBPP1-201ENST00000440192 890 ntBASIC4.76□□□□□ -1.65
NEK3P51956 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.76□□□□□ -1.65
NEK3P51956 MTND5P14-201ENST00000441481 1267 ntBASIC4.76□□□□□ -1.65
NEK3P51956 SETD6P1-201ENST00000444575 317 ntBASIC4.76□□□□□ -1.65
NEK3P51956 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.76□□□□□ -1.65
NEK3P51956 AC005297.2-201ENST00000450430 606 ntBASIC4.76□□□□□ -1.65
NEK3P51956 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.76□□□□□ -1.65
NEK3P51956 AC079168.2-201ENST00000453977 416 ntBASIC4.76□□□□□ -1.65
NEK3P51956 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.76□□□□□ -1.65
NEK3P51956 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.76□□□□□ -1.65
NEK3P51956 RPL7AP28-201ENST00000464513 571 ntBASIC4.76□□□□□ -1.65
NEK3P51956 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NEK3P51956 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.76□□□□□ -1.65
NEK3P51956 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.76□□□□□ -1.65
NEK3P51956 RNU6-27P-201ENST00000516146 107 ntBASIC4.76□□□□□ -1.65
NEK3P51956 RNU6-232P-201ENST00000517144 64 ntBASIC4.76□□□□□ -1.65
NEK3P51956 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.76□□□□□ -1.65
NEK3P51956 HIGD1AP5-201ENST00000529959 259 ntBASIC4.76□□□□□ -1.65
NEK3P51956 AC068587.4-201ENST00000533893 186 ntBASIC4.76□□□□□ -1.65
NEK3P51956 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.76□□□□□ -1.65
NEK3P51956 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.76□□□□□ -1.65
NEK3P51956 AC109446.2-201ENST00000567872 497 ntBASIC4.76□□□□□ -1.65
NEK3P51956 AC090615.1-201ENST00000577519 154 ntBASIC4.76□□□□□ -1.65
NEK3P51956 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.76□□□□□ -1.65
NEK3P51956 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NEK3P51956 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.76□□□□□ -1.65
NEK3P51956 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.76□□□□□ -1.65
NEK3P51956 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.76□□□□□ -1.65
NEK3P51956 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.76□□□□□ -1.65
NEK3P51956 AC055876.5-201ENST00000605667 259 ntBASIC4.76□□□□□ -1.65
NEK3P51956 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.76□□□□□ -1.65
NEK3P51956 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
NEK3P51956 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
NEK3P51956 SCN1A-220ENST00000641603 12506 ntBASIC4.76□□□□□ -1.65
NEK3P51956 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.76□□□□□ -1.65
NEK3P51956 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEK3P51956 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NEK3P51956 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NEK3P51956 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NEK3P51956 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NEK3P51956 AL022578.1-201ENST00000439330 1433 ntBASIC4.75□□□□□ -1.65
NEK3P51956 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEK3P51956 RNU6-28P-201ENST00000362378 107 ntBASIC4.75□□□□□ -1.65
NEK3P51956 RNA5SP28-201ENST00000363841 119 ntBASIC4.75□□□□□ -1.65
NEK3P51956 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEK3P51956 RNU6-723P-201ENST00000383973 107 ntBASIC4.75□□□□□ -1.65
NEK3P51956 SNORD116-8-201ENST00000384365 95 ntBASIC4.75□□□□□ -1.65
NEK3P51956 CEACAMP8-201ENST00000413902 580 ntBASIC4.75□□□□□ -1.65
NEK3P51956 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.75□□□□□ -1.65
NEK3P51956 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.75□□□□□ -1.65
NEK3P51956 AC092832.1-201ENST00000422934 400 ntBASIC4.75□□□□□ -1.65
NEK3P51956 USP9YP7-201ENST00000436723 430 ntBASIC4.75□□□□□ -1.65
NEK3P51956 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.75□□□□□ -1.65
NEK3P51956 Z95327.1-201ENST00000446082 482 ntBASIC4.75□□□□□ -1.65
NEK3P51956 EEF1E1P1-201ENST00000446998 430 ntBASIC4.75□□□□□ -1.65
NEK3P51956 HMGN2P21-201ENST00000447764 270 ntBASIC4.75□□□□□ -1.65
NEK3P51956 USP9YP32-201ENST00000452432 430 ntBASIC4.75□□□□□ -1.65
NEK3P51956 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.75□□□□□ -1.65
NEK3P51956 BZW1P2-201ENST00000473537 826 ntBASIC4.75□□□□□ -1.65
NEK3P51956 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.75□□□□□ -1.65
NEK3P51956 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.75□□□□□ -1.65
NEK3P51956 TXNP6-201ENST00000510190 310 ntBASIC4.75□□□□□ -1.65
NEK3P51956 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.75□□□□□ -1.65
NEK3P51956 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.75□□□□□ -1.65
NEK3P51956 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.75□□□□□ -1.65
NEK3P51956 AC087276.1-201ENST00000529659 480 ntBASIC4.75□□□□□ -1.65
NEK3P51956 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.75□□□□□ -1.65
NEK3P51956 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEK3P51956 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.75□□□□□ -1.65
NEK3P51956 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.75□□□□□ -1.65
NEK3P51956 AC090888.1-201ENST00000561335 1141 ntBASIC4.75□□□□□ -1.65
NEK3P51956 RN7SL652P-201ENST00000577769 300 ntBASIC4.75□□□□□ -1.65
NEK3P51956 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.75□□□□□ -1.65
NEK3P51956 AL353997.4-201ENST00000586196 166 ntBASIC4.75□□□□□ -1.65
NEK3P51956 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.75□□□□□ -1.65
NEK3P51956 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.75□□□□□ -1.65
NEK3P51956 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.75□□□□□ -1.65
NEK3P51956 AL365503.1-201ENST00000605247 905 ntBASIC4.75□□□□□ -1.65
NEK3P51956 AC090186.1-201ENST00000605991 572 ntBASIC4.75□□□□□ -1.65
NEK3P51956 AC072039.2-201ENST00000608883 439 ntBASIC4.75□□□□□ -1.65
NEK3P51956 AC019193.2-201ENST00000610012 634 ntBASIC4.75□□□□□ -1.65
NEK3P51956 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEK3P51956 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.75□□□□□ -1.65
NEK3P51956 AC122133.1-201ENST00000613964 233 ntBASIC4.75□□□□□ -1.65
NEK3P51956 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.75□□□□□ -1.65
NEK3P51956 AC040168.1-201ENST00000623594 991 ntBASIC4.75□□□□□ -1.65
NEK3P51956 AC091925.2-201ENST00000625059 256 ntBASIC4.75□□□□□ -1.65
NEK3P51956 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.75□□□□□ -1.65
NEK3P51956 AC099063.3-201ENST00000642066 185 ntBASIC4.75□□□□□ -1.65
NEK3P51956 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.75□□□□□ -1.65
NEK3P51956 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NEK3P51956 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.75□□□□□ -1.65
NEK3P51956 AC068254.2-201ENST00000623938 3577 ntBASIC4.75□□□□□ -1.65
NEK3P51956 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
NEK3P51956 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.75□□□□□ -1.65
NEK3P51956 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
NEK3P51956 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms