Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.04□□□□□ -1.76
LHX1P48742 SNORA84-201ENST00000459229 133 ntBASIC4.04□□□□□ -1.76
LHX1P48742 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
LHX1P48742 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.04□□□□□ -1.76
LHX1P48742 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.04□□□□□ -1.76
LHX1P48742 PTP4A1P6-201ENST00000531034 478 ntBASIC4.04□□□□□ -1.76
LHX1P48742 OR8K4P-201ENST00000534608 872 ntBASIC4.04□□□□□ -1.76
LHX1P48742 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.04□□□□□ -1.76
LHX1P48742 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.04□□□□□ -1.76
LHX1P48742 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.04□□□□□ -1.76
LHX1P48742 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.04□□□□□ -1.76
LHX1P48742 AC090877.1-201ENST00000561418 344 ntBASIC4.04□□□□□ -1.76
LHX1P48742 MIR1254-2-201ENST00000579553 63 ntBASIC4.04□□□□□ -1.76
LHX1P48742 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.04□□□□□ -1.76
LHX1P48742 AC245389.1-201ENST00000605141 529 ntBASIC4.04□□□□□ -1.76
LHX1P48742 AL391497.1-201ENST00000608671 547 ntBASIC4.04□□□□□ -1.76
LHX1P48742 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.04□□□□□ -1.76
LHX1P48742 AL138478.1-201ENST00000612252 832 ntBASIC4.04□□□□□ -1.76
LHX1P48742 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
LHX1P48742 AC233309.1-201ENST00000619522 751 ntBASIC4.04□□□□□ -1.76
LHX1P48742 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.04□□□□□ -1.76
LHX1P48742 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.04□□□□□ -1.76
LHX1P48742 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.04□□□□□ -1.76
LHX1P48742 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LHX1P48742 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
LHX1P48742 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
LHX1P48742 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LHX1P48742 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LHX1P48742 MTND5P28-201ENST00000438005 1594 ntBASIC4.03□□□□□ -1.76
LHX1P48742 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.03□□□□□ -1.76
LHX1P48742 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
LHX1P48742 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
LHX1P48742 RNU1-85P-201ENST00000364127 164 ntBASIC4.03□□□□□ -1.76
LHX1P48742 SNORA62.3-201ENST00000365110 153 ntBASIC4.03□□□□□ -1.76
LHX1P48742 SNORD116-23-201ENST00000384645 92 ntBASIC4.03□□□□□ -1.76
LHX1P48742 U8.11-201ENST00000384699 133 ntBASIC4.03□□□□□ -1.76
LHX1P48742 U8.12-201ENST00000384701 133 ntBASIC4.03□□□□□ -1.76
LHX1P48742 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
LHX1P48742 MTCO3P31-201ENST00000405526 789 ntBASIC4.03□□□□□ -1.76
LHX1P48742 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
LHX1P48742 RNA5SP104-201ENST00000410989 118 ntBASIC4.03□□□□□ -1.76
LHX1P48742 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.03□□□□□ -1.76
LHX1P48742 RPS15AP40-201ENST00000419621 391 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AC009237.2-201ENST00000421358 284 ntBASIC4.03□□□□□ -1.76
LHX1P48742 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.03□□□□□ -1.76
LHX1P48742 OR4F13P-201ENST00000428478 931 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AC092393.1-201ENST00000439625 742 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.03□□□□□ -1.76
LHX1P48742 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.03□□□□□ -1.76
LHX1P48742 NDUFA5P7-201ENST00000452914 242 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AC092155.2-201ENST00000454675 477 ntBASIC4.03□□□□□ -1.76
LHX1P48742 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.03□□□□□ -1.76
LHX1P48742 U8.18-201ENST00000459285 133 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AC007537.2-201ENST00000472093 511 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AC084198.1-201ENST00000477747 402 ntBASIC4.03□□□□□ -1.76
LHX1P48742 ACTR3P3-201ENST00000480448 893 ntBASIC4.03□□□□□ -1.76
LHX1P48742 VPS26AP1-201ENST00000483197 979 ntBASIC4.03□□□□□ -1.76
LHX1P48742 SNX5P1-201ENST00000505757 1041 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AC110760.3-202ENST00000515177 371 ntBASIC4.03□□□□□ -1.76
LHX1P48742 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.03□□□□□ -1.76
LHX1P48742 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.03□□□□□ -1.76
LHX1P48742 MTND2P26-201ENST00000528255 1029 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.03□□□□□ -1.76
LHX1P48742 AP001317.1-201ENST00000531194 960 ntBASIC4.03□□□□□ -1.76
LHX1P48742 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.03□□□□□ -1.76
LHX1P48742 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.03□□□□□ -1.76
LHX1P48742 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.03□□□□□ -1.76
LHX1P48742 MTND3P13-201ENST00000574391 343 ntBASIC4.03□□□□□ -1.76
LHX1P48742 MIR4760-201ENST00000585040 80 ntBASIC4.03□□□□□ -1.76
LHX1P48742 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.03□□□□□ -1.76
LHX1P48742 VN1R83P-201ENST00000595685 445 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AL137849.1-201ENST00000604767 169 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AL049634.3-201ENST00000604968 457 ntBASIC4.03□□□□□ -1.76
LHX1P48742 SNORA62.6-201ENST00000606322 83 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AC078899.5-201ENST00000612475 178 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AL121772.2-201ENST00000614331 297 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.03□□□□□ -1.76
LHX1P48742 CR392039.5-201ENST00000623201 510 ntBASIC4.03□□□□□ -1.76
LHX1P48742 AC068787.1-201ENST00000623908 691 ntBASIC4.03□□□□□ -1.76
LHX1P48742 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.03□□□□□ -1.76
LHX1P48742 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
LHX1P48742 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
LHX1P48742 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.77
LHX1P48742 MTND4P10-201ENST00000446199 1363 ntBASIC4.02□□□□□ -1.77
LHX1P48742 Z73965.1-201ENST00000623412 2297 ntBASIC4.02□□□□□ -1.77
LHX1P48742 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.02□□□□□ -1.77
LHX1P48742 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
LHX1P48742 MAPK10-372ENST00000641954 3413 ntBASIC4.02□□□□□ -1.77
LHX1P48742 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LHX1P48742 RNU6-115P-201ENST00000364310 107 ntBASIC4.02□□□□□ -1.77
LHX1P48742 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
LHX1P48742 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
LHX1P48742 MIR217-201ENST00000384817 110 ntBASIC4.02□□□□□ -1.77
LHX1P48742 HLFP1-201ENST00000402375 499 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AL133264.1-201ENST00000407157 562 ntBASIC4.02□□□□□ -1.77
LHX1P48742 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.02□□□□□ -1.77
LHX1P48742 RPS3AP37-201ENST00000419176 745 ntBASIC4.02□□□□□ -1.77
LHX1P48742 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.02□□□□□ -1.77
LHX1P48742 Z93242.1-201ENST00000427102 353 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms