Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.61□□□□□ -1.83
NKX2-1P43699 INTS6P1-201ENST00000504674 2530 ntBASIC3.61□□□□□ -1.83
NKX2-1P43699 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX2-1P43699 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-1P43699 CPHL1P-201ENST00000461341 3407 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 MTCO1P23-201ENST00000415223 1526 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 Y_RNA.169-201ENST00000363745 96 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 RNVU1-3-201ENST00000364313 161 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 RNU6-1200P-201ENST00000384162 107 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 RNU6-339P-201ENST00000384310 107 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 MIR323B-201ENST00000385269 82 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 RPL31P1-201ENST00000398116 372 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 SDHCP2-201ENST00000398565 501 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AL590084.2-201ENST00000401481 382 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 RNA5SP56-201ENST00000410277 118 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-1P43699 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-1P43699 BX510359.3-201ENST00000422168 306 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AL365338.1-201ENST00000422282 858 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 RBMY1KP-201ENST00000423480 476 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AC234781.2-201ENST00000426370 994 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC006548.1-201ENST00000427470 102 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-1P43699 RBMY2QP-201ENST00000429799 1147 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC008072.1-201ENST00000434254 824 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-1P43699 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.6□□□□□ -1.83
NKX2-1P43699 snoU13.20-201ENST00000459180 104 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC026410.2-201ENST00000460281 156 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 RN7SL585P-201ENST00000470538 280 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 RPS15AP17-201ENST00000470598 390 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 RN7SL177P-201ENST00000476596 299 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 RPL7AP6-201ENST00000477943 801 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AC108941.1-201ENST00000502853 530 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC111000.2-201ENST00000507775 550 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.6□□□□□ -1.83
NKX2-1P43699 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX2-1P43699 RNU2-30P-201ENST00000516209 141 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 RNU6-232P-201ENST00000517144 64 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 IGKV2D-36-201ENST00000518643 226 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AL512347.1-201ENST00000566420 503 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-1P43699 OR7E18P-201ENST00000592589 702 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-1P43699 Z94722.1-201ENST00000604328 474 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 IGHV3-29-201ENST00000604817 344 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC005084.1-201ENST00000605160 304 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC072039.2-201ENST00000608883 439 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AL136981.2-201ENST00000617319 734 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-1P43699 AC068870.2-201ENST00000620635 389 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 AP000676.3-201ENST00000623299 569 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 CR381572.1-201ENST00000625098 102 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 U6.101-201ENST00000637707 76 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-1P43699 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NKX2-1P43699 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 AL445523.1-201ENST00000451184 1362 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 DDX43P2-201ENST00000604753 1354 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX2-1P43699 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NKX2-1P43699 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NKX2-1P43699 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-1P43699 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 MAPK10-253ENST00000641010 4072 ntBASIC3.6□□□□□ -1.83
NKX2-1P43699 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.59□□□□□ -1.83
NKX2-1P43699 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NKX2-1P43699 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-1P43699 NUP58P1-201ENST00000502546 1738 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.83
NKX2-1P43699 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-1P43699 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-1P43699 RNU6-500P-201ENST00000362349 107 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 RN7SKP44-201ENST00000363602 316 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
NKX2-1P43699 SNORD116-1-201ENST00000384335 95 ntBASIC3.59□□□□□ -1.83
NKX2-1P43699 AC016769.3-201ENST00000396562 315 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms