Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ZNF602P-201ENST00000405929 924 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AL583834.1-201ENST00000406943 343 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.01□□□□□ -1.77
HNF4AP41235 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.01□□□□□ -1.77
HNF4AP41235 AC022034.3-201ENST00000471393 478 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AC091167.1-201ENST00000492017 396 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.01□□□□□ -1.77
HNF4AP41235 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.01□□□□□ -1.77
HNF4AP41235 AC099522.1-202ENST00000514718 367 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.01□□□□□ -1.77
HNF4AP41235 ZNF705CP-201ENST00000530515 889 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.01□□□□□ -1.77
HNF4AP41235 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.01□□□□□ -1.77
HNF4AP41235 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.01□□□□□ -1.77
HNF4AP41235 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.01□□□□□ -1.77
HNF4AP41235 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.01□□□□□ -1.77
HNF4AP41235 AL132857.1-201ENST00000555180 708 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HNF4AP41235 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.01□□□□□ -1.77
HNF4AP41235 AP001542.2-201ENST00000593141 364 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AC020914.4-201ENST00000597690 277 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AC103881.1-201ENST00000603476 538 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AL161729.3-201ENST00000603533 673 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AL590282.1-201ENST00000610379 1136 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AC087683.2-201ENST00000611384 326 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AC005962.2-201ENST00000611427 652 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 MIR3653-201ENST00000625572 110 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.01□□□□□ -1.77
HNF4AP41235 MIR6830-201ENST00000636015 70 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 AC130650.2-201ENST00000618736 2403 ntBASIC4.01□□□□□ -1.77
HNF4AP41235 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HNF4AP41235 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HNF4AP41235 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4□□□□□ -1.77
HNF4AP41235 AC027287.1-201ENST00000553115 1453 ntBASIC4□□□□□ -1.77
HNF4AP41235 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4□□□□□ -1.77
HNF4AP41235 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HNF4AP41235 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
HNF4AP41235 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4□□□□□ -1.77
HNF4AP41235 RNU5B-1-201ENST00000363286 116 ntBASIC4□□□□□ -1.77
HNF4AP41235 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4□□□□□ -1.77
HNF4AP41235 RNU6-629P-201ENST00000384061 103 ntBASIC4□□□□□ -1.77
HNF4AP41235 ANAPC10P1-201ENST00000395991 556 ntBASIC4□□□□□ -1.77
HNF4AP41235 RNA5SP306-201ENST00000411087 107 ntBASIC4□□□□□ -1.77
HNF4AP41235 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4□□□□□ -1.77
HNF4AP41235 AC092447.3-201ENST00000426027 686 ntBASIC4□□□□□ -1.77
HNF4AP41235 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4□□□□□ -1.77
HNF4AP41235 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4□□□□□ -1.77
HNF4AP41235 MRPS18BP2-201ENST00000434310 759 ntBASIC4□□□□□ -1.77
HNF4AP41235 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4□□□□□ -1.77
HNF4AP41235 RPL23AP16-201ENST00000441715 421 ntBASIC4□□□□□ -1.77
HNF4AP41235 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4□□□□□ -1.77
HNF4AP41235 AL031313.1-201ENST00000448435 256 ntBASIC4□□□□□ -1.77
HNF4AP41235 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4□□□□□ -1.77
HNF4AP41235 AC010618.1-201ENST00000469924 477 ntBASIC4□□□□□ -1.77
HNF4AP41235 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4□□□□□ -1.77
HNF4AP41235 UBE2CP3-201ENST00000502715 450 ntBASIC4□□□□□ -1.77
HNF4AP41235 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4□□□□□ -1.77
HNF4AP41235 AC020699.1-201ENST00000505161 445 ntBASIC4□□□□□ -1.77
HNF4AP41235 AC025554.1-201ENST00000505641 188 ntBASIC4□□□□□ -1.77
HNF4AP41235 USP9YP5-201ENST00000511770 630 ntBASIC4□□□□□ -1.77
HNF4AP41235 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4□□□□□ -1.77
HNF4AP41235 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4□□□□□ -1.77
HNF4AP41235 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4□□□□□ -1.77
HNF4AP41235 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4□□□□□ -1.77
HNF4AP41235 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4□□□□□ -1.77
HNF4AP41235 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4□□□□□ -1.77
HNF4AP41235 AC009712.1-201ENST00000564938 316 ntBASIC4□□□□□ -1.77
HNF4AP41235 AC022655.2-201ENST00000577280 318 ntBASIC4□□□□□ -1.77
HNF4AP41235 AC069366.1-201ENST00000583159 838 ntBASIC4□□□□□ -1.77
HNF4AP41235 AL365400.2-201ENST00000605604 902 ntBASIC4□□□□□ -1.77
HNF4AP41235 RNU4-5P-201ENST00000607255 135 ntBASIC4□□□□□ -1.77
HNF4AP41235 AC009974.1-201ENST00000608881 455 ntBASIC4□□□□□ -1.77
HNF4AP41235 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4□□□□□ -1.77
HNF4AP41235 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4□□□□□ -1.77
HNF4AP41235 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4□□□□□ -1.77
HNF4AP41235 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4□□□□□ -1.77
HNF4AP41235 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HNF4AP41235 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HNF4AP41235 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4□□□□□ -1.77
HNF4AP41235 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HNF4AP41235 LARP1BP1-201ENST00000506036 1359 ntBASIC4□□□□□ -1.77
HNF4AP41235 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HNF4AP41235 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
HNF4AP41235 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HNF4AP41235 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
HNF4AP41235 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HNF4AP41235 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.99□□□□□ -1.77
HNF4AP41235 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
HNF4AP41235 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
HNF4AP41235 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
HNF4AP41235 SNORA37-201ENST00000384504 129 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AL133384.1-201ENST00000412744 351 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 PGBD4P8-201ENST00000412993 562 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AL592310.1-201ENST00000414330 671 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.99□□□□□ -1.77
HNF4AP41235 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.99□□□□□ -1.77
HNF4AP41235 COX6CP17-201ENST00000421389 185 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 NANOGP5-201ENST00000424456 877 ntBASIC3.99□□□□□ -1.77
HNF4AP41235 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HNF4AP41235 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms