Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CCNFP41002 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCNFP41002 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNFP41002 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CCNFP41002 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCNFP41002 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.48□□□□□ -1.53
CCNFP41002 AC092447.10-201ENST00000620607 1652 ntBASIC5.48□□□□□ -1.53
CCNFP41002 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCNFP41002 RNU6-223P-201ENST00000362830 107 ntBASIC5.48□□□□□ -1.53
CCNFP41002 RNU6-451P-201ENST00000362921 107 ntBASIC5.48□□□□□ -1.53
CCNFP41002 SNORA69-201ENST00000383895 132 ntBASIC5.48□□□□□ -1.53
CCNFP41002 RNU6-1226P-201ENST00000384317 107 ntBASIC5.48□□□□□ -1.53
CCNFP41002 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.48□□□□□ -1.53
CCNFP41002 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.48□□□□□ -1.53
CCNFP41002 AC073136.2-201ENST00000417282 849 ntBASIC5.48□□□□□ -1.53
CCNFP41002 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNFP41002 RPL12P34-201ENST00000424532 479 ntBASIC5.48□□□□□ -1.53
CCNFP41002 AL590233.1-201ENST00000430017 456 ntBASIC5.48□□□□□ -1.53
CCNFP41002 RPS29P14-201ENST00000431518 171 ntBASIC5.48□□□□□ -1.53
CCNFP41002 ATP5JP1-201ENST00000431631 322 ntBASIC5.48□□□□□ -1.53
CCNFP41002 RPL19P16-201ENST00000433839 588 ntBASIC5.48□□□□□ -1.53
CCNFP41002 SLC25A18P1-201ENST00000449385 454 ntBASIC5.48□□□□□ -1.53
CCNFP41002 TCEA1P1-201ENST00000449716 880 ntBASIC5.48□□□□□ -1.53
CCNFP41002 RPL31P15-201ENST00000449770 338 ntBASIC5.48□□□□□ -1.53
CCNFP41002 AC083798.1-201ENST00000472671 131 ntBASIC5.48□□□□□ -1.53
CCNFP41002 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.48□□□□□ -1.53
CCNFP41002 RPL39P36-201ENST00000490784 156 ntBASIC5.48□□□□□ -1.53
CCNFP41002 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.48□□□□□ -1.53
CCNFP41002 HMGN1P9-201ENST00000515212 298 ntBASIC5.48□□□□□ -1.53
CCNFP41002 RNA5SP401-201ENST00000515920 127 ntBASIC5.48□□□□□ -1.53
CCNFP41002 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC5.48□□□□□ -1.53
CCNFP41002 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNFP41002 NRBF2P4-201ENST00000520874 850 ntBASIC5.48□□□□□ -1.53
CCNFP41002 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.48□□□□□ -1.53
CCNFP41002 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNFP41002 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.48□□□□□ -1.53
CCNFP41002 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCNFP41002 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.48□□□□□ -1.53
CCNFP41002 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.48□□□□□ -1.53
CCNFP41002 AC015917.1-201ENST00000579654 510 ntBASIC5.48□□□□□ -1.53
CCNFP41002 AC007448.1-201ENST00000582714 234 ntBASIC5.48□□□□□ -1.53
CCNFP41002 PRPF19P1-201ENST00000584766 898 ntBASIC5.48□□□□□ -1.53
CCNFP41002 AL353997.4-201ENST00000586196 166 ntBASIC5.48□□□□□ -1.53
CCNFP41002 AC008521.2-201ENST00000591021 259 ntBASIC5.48□□□□□ -1.53
CCNFP41002 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNFP41002 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.48□□□□□ -1.53
CCNFP41002 AC126177.8-201ENST00000618339 1015 ntBASIC5.48□□□□□ -1.53
CCNFP41002 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.48□□□□□ -1.53
CCNFP41002 AC112204.3-201ENST00000623822 332 ntBASIC5.48□□□□□ -1.53
CCNFP41002 AC100810.6-201ENST00000638068 285 ntBASIC5.48□□□□□ -1.53
CCNFP41002 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.48□□□□□ -1.53
CCNFP41002 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.48□□□□□ -1.53
CCNFP41002 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCNFP41002 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCNFP41002 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
CCNFP41002 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCNFP41002 AC114546.3-201ENST00000623582 1734 ntBASIC5.48□□□□□ -1.53
CCNFP41002 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.48□□□□□ -1.53
CCNFP41002 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCNFP41002 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.48□□□□□ -1.53
CCNFP41002 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.47□□□□□ -1.53
CCNFP41002 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.47□□□□□ -1.53
CCNFP41002 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.47□□□□□ -1.53
CCNFP41002 AC105074.1-201ENST00000623380 3095 ntBASIC5.47□□□□□ -1.53
CCNFP41002 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CCNFP41002 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.47□□□□□ -1.53
CCNFP41002 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.47□□□□□ -1.53
CCNFP41002 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCNFP41002 Y_RNA.72-201ENST00000362894 103 ntBASIC5.47□□□□□ -1.53
CCNFP41002 OR1L6-202ENST00000373684 1044 ntBASIC5.47□□□□□ -1.53
CCNFP41002 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCNFP41002 RNU6-1207P-201ENST00000384343 107 ntBASIC5.47□□□□□ -1.53
CCNFP41002 RPS4XP8-201ENST00000402039 771 ntBASIC5.47□□□□□ -1.53
CCNFP41002 SNORA11B-201ENST00000408175 129 ntBASIC5.47□□□□□ -1.53
CCNFP41002 RNA5SP118-201ENST00000410385 109 ntBASIC5.47□□□□□ -1.53
CCNFP41002 RPS20P15-201ENST00000412792 311 ntBASIC5.47□□□□□ -1.53
CCNFP41002 AC016769.2-201ENST00000414815 475 ntBASIC5.47□□□□□ -1.53
CCNFP41002 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 AC007390.1-201ENST00000415722 356 ntBASIC5.47□□□□□ -1.53
CCNFP41002 BMS1P17-202ENST00000416720 316 ntBASIC5.47□□□□□ -1.53
CCNFP41002 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.47□□□□□ -1.53
CCNFP41002 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 AL662874.1-201ENST00000426065 230 ntBASIC5.47□□□□□ -1.53
CCNFP41002 OR2B7P-201ENST00000429302 934 ntBASIC5.47□□□□□ -1.53
CCNFP41002 RPL23AP30-201ENST00000432419 501 ntBASIC5.47□□□□□ -1.53
CCNFP41002 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 HMGN1P36-201ENST00000446623 298 ntBASIC5.47□□□□□ -1.53
CCNFP41002 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.47□□□□□ -1.53
CCNFP41002 EIF4A1P11-201ENST00000451239 222 ntBASIC5.47□□□□□ -1.53
CCNFP41002 AC104073.1-201ENST00000451988 151 ntBASIC5.47□□□□□ -1.53
CCNFP41002 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms