Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP8P40818 AL079342.2-201ENST00000403367 482 ntBASIC4.3□□□□□ -1.72
USP8P40818 AL590084.1-201ENST00000407885 387 ntBASIC4.3□□□□□ -1.72
USP8P40818 SNORA11C-201ENST00000408532 129 ntBASIC4.3□□□□□ -1.72
USP8P40818 RNU6-77P-201ENST00000410554 91 ntBASIC4.3□□□□□ -1.72
USP8P40818 TPT1P2-201ENST00000413105 503 ntBASIC4.3□□□□□ -1.72
USP8P40818 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.3□□□□□ -1.72
USP8P40818 PTP4A1P5-201ENST00000420305 455 ntBASIC4.3□□□□□ -1.72
USP8P40818 AC009965.2-201ENST00000425328 970 ntBASIC4.3□□□□□ -1.72
USP8P40818 AC011742.1-201ENST00000431448 434 ntBASIC4.3□□□□□ -1.72
USP8P40818 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.3□□□□□ -1.72
USP8P40818 SETD6P1-201ENST00000444575 317 ntBASIC4.3□□□□□ -1.72
USP8P40818 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.3□□□□□ -1.72
USP8P40818 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.3□□□□□ -1.72
USP8P40818 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.3□□□□□ -1.72
USP8P40818 AC009220.1-201ENST00000451614 275 ntBASIC4.3□□□□□ -1.72
USP8P40818 MTCO3P16-201ENST00000454456 754 ntBASIC4.3□□□□□ -1.72
USP8P40818 NECAP1P2-201ENST00000455668 727 ntBASIC4.3□□□□□ -1.72
USP8P40818 RPL23AP14-201ENST00000468281 468 ntBASIC4.3□□□□□ -1.72
USP8P40818 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP8P40818 AC073522.1-201ENST00000483312 377 ntBASIC4.3□□□□□ -1.72
USP8P40818 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.3□□□□□ -1.72
USP8P40818 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.3□□□□□ -1.72
USP8P40818 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.3□□□□□ -1.72
USP8P40818 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.3□□□□□ -1.72
USP8P40818 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.3□□□□□ -1.72
USP8P40818 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.3□□□□□ -1.72
USP8P40818 AC092747.2-201ENST00000545069 983 ntBASIC4.3□□□□□ -1.72
USP8P40818 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.3□□□□□ -1.72
USP8P40818 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.3□□□□□ -1.72
USP8P40818 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.3□□□□□ -1.72
USP8P40818 AC004223.2-201ENST00000590309 544 ntBASIC4.3□□□□□ -1.72
USP8P40818 BNIP3P24-201ENST00000593398 557 ntBASIC4.3□□□□□ -1.72
USP8P40818 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.3□□□□□ -1.72
USP8P40818 AC097478.2-201ENST00000610572 514 ntBASIC4.3□□□□□ -1.72
USP8P40818 OR1S1-201ENST00000624470 978 ntBASIC4.3□□□□□ -1.72
USP8P40818 AF001550.2-201ENST00000636643 217 ntBASIC4.3□□□□□ -1.72
USP8P40818 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
USP8P40818 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
USP8P40818 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP8P40818 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP8P40818 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
USP8P40818 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
USP8P40818 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP8P40818 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.29□□□□□ -1.72
USP8P40818 AC012321.1-201ENST00000561622 1588 ntBASIC4.29□□□□□ -1.72
USP8P40818 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USP8P40818 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USP8P40818 NACA3P-201ENST00000359690 648 ntBASIC4.29□□□□□ -1.72
USP8P40818 OR1L1-202ENST00000373686 1083 ntBASIC4.29□□□□□ -1.72
USP8P40818 RNU6-83P-201ENST00000384568 112 ntBASIC4.29□□□□□ -1.72
USP8P40818 ENSAP1-201ENST00000392855 326 ntBASIC4.29□□□□□ -1.72
USP8P40818 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP8P40818 RNU6-575P-201ENST00000411326 105 ntBASIC4.29□□□□□ -1.72
USP8P40818 AC009237.5-201ENST00000414271 501 ntBASIC4.29□□□□□ -1.72
USP8P40818 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.29□□□□□ -1.72
USP8P40818 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.29□□□□□ -1.72
USP8P40818 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.29□□□□□ -1.72
USP8P40818 NPM1P24-201ENST00000428039 894 ntBASIC4.29□□□□□ -1.72
USP8P40818 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.29□□□□□ -1.72
USP8P40818 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.29□□□□□ -1.72
USP8P40818 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.29□□□□□ -1.72
USP8P40818 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.29□□□□□ -1.72
USP8P40818 AC002542.1-201ENST00000440683 193 ntBASIC4.29□□□□□ -1.72
USP8P40818 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.29□□□□□ -1.72
USP8P40818 RPS11P1-201ENST00000451072 473 ntBASIC4.29□□□□□ -1.72
USP8P40818 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.29□□□□□ -1.72
USP8P40818 PRDX3P4-201ENST00000470828 747 ntBASIC4.29□□□□□ -1.72
USP8P40818 AC023632.1-201ENST00000518463 375 ntBASIC4.29□□□□□ -1.72
USP8P40818 AC008802.1-201ENST00000519121 791 ntBASIC4.29□□□□□ -1.72
USP8P40818 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.29□□□□□ -1.72
USP8P40818 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.29□□□□□ -1.72
USP8P40818 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.29□□□□□ -1.72
USP8P40818 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.29□□□□□ -1.72
USP8P40818 AADACP1-206ENST00000561502 1193 ntBASIC4.29□□□□□ -1.72
USP8P40818 AC022968.1-201ENST00000567372 442 ntBASIC4.29□□□□□ -1.72
USP8P40818 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.29□□□□□ -1.72
USP8P40818 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.29□□□□□ -1.72
USP8P40818 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
USP8P40818 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.29□□□□□ -1.72
USP8P40818 AP005137.2-201ENST00000609238 400 ntBASIC4.29□□□□□ -1.72
USP8P40818 AC093783.1-201ENST00000612976 329 ntBASIC4.29□□□□□ -1.72
USP8P40818 MIR7973-1-201ENST00000614683 76 ntBASIC4.29□□□□□ -1.72
USP8P40818 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.29□□□□□ -1.72
USP8P40818 ATE1-AS1-202ENST00000636460 506 ntBASIC4.29□□□□□ -1.72
USP8P40818 NOL8P1-201ENST00000508336 3529 ntBASIC4.29□□□□□ -1.72
USP8P40818 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP8P40818 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.29□□□□□ -1.72
USP8P40818 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP8P40818 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
USP8P40818 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP8P40818 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP8P40818 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP8P40818 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP8P40818 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
USP8P40818 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP8P40818 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP8P40818 AL121657.1-201ENST00000327215 531 ntBASIC4.28□□□□□ -1.72
USP8P40818 Y_RNA.169-201ENST00000363745 96 ntBASIC4.28□□□□□ -1.72
USP8P40818 snoZ40.1-201ENST00000364540 72 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms