Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC083906.5-201ENST00000503722 328 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 AP000859.1-201ENST00000525536 307 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 AC079600.2-201ENST00000550076 130 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.65□□□□□ -1.82
SCN4AP35499 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.65□□□□□ -1.82
SCN4AP35499 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.65□□□□□ -1.82
SCN4AP35499 PRELID3BP8-201ENST00000604148 295 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 MIR7843-201ENST00000622274 79 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 AC092628.2-201ENST00000622492 339 ntBASIC3.65□□□□□ -1.82
SCN4AP35499 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.65□□□□□ -1.82
SCN4AP35499 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.65□□□□□ -1.82
SCN4AP35499 AC021755.1-201ENST00000559747 1447 ntBASIC3.65□□□□□ -1.83
SCN4AP35499 AL049780.3-201ENST00000624612 1583 ntBASIC3.65□□□□□ -1.83
SCN4AP35499 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
SCN4AP35499 ARL5AP4-201ENST00000430731 512 ntBASIC3.65□□□□□ -1.83
SCN4AP35499 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.65□□□□□ -1.83
SCN4AP35499 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.65□□□□□ -1.83
SCN4AP35499 AP000926.3-201ENST00000497201 299 ntBASIC3.65□□□□□ -1.83
SCN4AP35499 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.65□□□□□ -1.83
SCN4AP35499 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
SCN4AP35499 RNU6-1231P-201ENST00000517185 103 ntBASIC3.65□□□□□ -1.83
SCN4AP35499 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.65□□□□□ -1.83
SCN4AP35499 AC010615.3-201ENST00000597319 394 ntBASIC3.65□□□□□ -1.83
SCN4AP35499 AP001005.3-201ENST00000622049 129 ntBASIC3.65□□□□□ -1.83
SCN4AP35499 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.65□□□□□ -1.83
SCN4AP35499 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
SCN4AP35499 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SCN4AP35499 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
SCN4AP35499 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SCN4AP35499 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SCN4AP35499 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.64□□□□□ -1.83
SCN4AP35499 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.64□□□□□ -1.83
SCN4AP35499 ETF1P3-201ENST00000430422 1160 ntBASIC3.64□□□□□ -1.83
SCN4AP35499 AC007563.3-201ENST00000433233 371 ntBASIC3.64□□□□□ -1.83
SCN4AP35499 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.64□□□□□ -1.83
SCN4AP35499 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.64□□□□□ -1.83
SCN4AP35499 OR7L1P-201ENST00000456181 380 ntBASIC3.64□□□□□ -1.83
SCN4AP35499 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.64□□□□□ -1.83
SCN4AP35499 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.64□□□□□ -1.83
SCN4AP35499 RFPL4AP3-201ENST00000515267 345 ntBASIC3.64□□□□□ -1.83
SCN4AP35499 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.64□□□□□ -1.83
SCN4AP35499 HMGB3P26-201ENST00000560051 582 ntBASIC3.64□□□□□ -1.83
SCN4AP35499 AC026790.2-201ENST00000606282 430 ntBASIC3.64□□□□□ -1.83
SCN4AP35499 AC004825.2-201ENST00000616634 455 ntBASIC3.64□□□□□ -1.83
SCN4AP35499 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SCN4AP35499 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SCN4AP35499 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SCN4AP35499 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
SCN4AP35499 RNU6-851P-201ENST00000384565 107 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.63□□□□□ -1.83
SCN4AP35499 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCN4AP35499 ZYG11AP1-201ENST00000430329 837 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 UBE2V2P1-201ENST00000434717 398 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.63□□□□□ -1.83
SCN4AP35499 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN4AP35499 AC016687.1-201ENST00000482574 353 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.63□□□□□ -1.83
SCN4AP35499 GOLGA5P1-201ENST00000507317 980 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 AC113398.2-201ENST00000507630 558 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.63□□□□□ -1.83
SCN4AP35499 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN4AP35499 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN4AP35499 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.63□□□□□ -1.83
SCN4AP35499 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCN4AP35499 AGGF1P8-201ENST00000562979 1000 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCN4AP35499 AC046144.1-201ENST00000478559 1853 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
SCN4AP35499 AC093010.3-201ENST00000570269 15214 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCN4AP35499 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SCN4AP35499 GLRXP1-201ENST00000423261 334 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 RAB28P3-201ENST00000448325 597 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.63□□□□□ -1.83
SCN4AP35499 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN4AP35499 PRDX3P4-201ENST00000470828 747 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.63□□□□□ -1.83
SCN4AP35499 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
SCN4AP35499 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
SCN4AP35499 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.63□□□□□ -1.83
SCN4AP35499 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.63□□□□□ -1.83
SCN4AP35499 AC234778.2-201ENST00000566241 354 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 RNU6-84P-201ENST00000607737 102 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.63□□□□□ -1.83
SCN4AP35499 AC243829.7-201ENST00000633081 225 ntBASIC3.63□□□□□ -1.83
SCN4AP35499 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN4AP35499 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.62□□□□□ -1.83
SCN4AP35499 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SCN4AP35499 ASNSP1-201ENST00000518311 1939 ntBASIC3.62□□□□□ -1.83
SCN4AP35499 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN4AP35499 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCN4AP35499 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.62□□□□□ -1.83
SCN4AP35499 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.62□□□□□ -1.83
SCN4AP35499 AC069540.1-201ENST00000446320 988 ntBASIC3.62□□□□□ -1.83
SCN4AP35499 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.62□□□□□ -1.83
SCN4AP35499 SNORD109B-201ENST00000458961 67 ntBASIC3.62□□□□□ -1.83
SCN4AP35499 SNORD109A-201ENST00000459128 67 ntBASIC3.62□□□□□ -1.83
SCN4AP35499 AC010401.1-201ENST00000463867 348 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms