Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.62□□□□□ -1.67
CIITAP33076 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CIITAP33076 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CIITAP33076 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.62□□□□□ -1.67
CIITAP33076 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
CIITAP33076 MIR372-201ENST00000362225 67 ntBASIC4.62□□□□□ -1.67
CIITAP33076 MIR217-201ENST00000384817 110 ntBASIC4.62□□□□□ -1.67
CIITAP33076 PPIAP31-201ENST00000405422 495 ntBASIC4.62□□□□□ -1.67
CIITAP33076 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.62□□□□□ -1.67
CIITAP33076 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 HSPE1P12-201ENST00000412576 301 ntBASIC4.62□□□□□ -1.67
CIITAP33076 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.62□□□□□ -1.67
CIITAP33076 SEPT2P1-201ENST00000419651 180 ntBASIC4.62□□□□□ -1.67
CIITAP33076 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 GTF2IP23-201ENST00000423746 351 ntBASIC4.62□□□□□ -1.67
CIITAP33076 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.62□□□□□ -1.67
CIITAP33076 ATP5F1P1-201ENST00000433775 569 ntBASIC4.62□□□□□ -1.67
CIITAP33076 RPS26P40-201ENST00000435209 294 ntBASIC4.62□□□□□ -1.67
CIITAP33076 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.62□□□□□ -1.67
CIITAP33076 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.62□□□□□ -1.67
CIITAP33076 RFC5P1-201ENST00000454419 874 ntBASIC4.62□□□□□ -1.67
CIITAP33076 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.62□□□□□ -1.67
CIITAP33076 AC104689.1-201ENST00000473356 768 ntBASIC4.62□□□□□ -1.67
CIITAP33076 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.62□□□□□ -1.67
CIITAP33076 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.62□□□□□ -1.67
CIITAP33076 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CIITAP33076 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.62□□□□□ -1.67
CIITAP33076 MIR2116-201ENST00000517221 80 ntBASIC4.62□□□□□ -1.67
CIITAP33076 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.62□□□□□ -1.67
CIITAP33076 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 HIGD1AP17-201ENST00000554576 276 ntBASIC4.62□□□□□ -1.67
CIITAP33076 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.62□□□□□ -1.67
CIITAP33076 AC002400.1-201ENST00000569310 726 ntBASIC4.62□□□□□ -1.67
CIITAP33076 RPL23AP87-202ENST00000573039 466 ntBASIC4.62□□□□□ -1.67
CIITAP33076 AC067959.1-201ENST00000604334 379 ntBASIC4.62□□□□□ -1.67
CIITAP33076 AL451074.6-201ENST00000608512 729 ntBASIC4.62□□□□□ -1.67
CIITAP33076 AC018926.3-201ENST00000618841 406 ntBASIC4.62□□□□□ -1.67
CIITAP33076 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.62□□□□□ -1.67
CIITAP33076 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CIITAP33076 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.62□□□□□ -1.67
CIITAP33076 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.62□□□□□ -1.67
CIITAP33076 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.62□□□□□ -1.67
CIITAP33076 AL390862.1-201ENST00000635467 1469 ntBASIC4.62□□□□□ -1.67
CIITAP33076 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CIITAP33076 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CIITAP33076 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CIITAP33076 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CIITAP33076 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
CIITAP33076 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CIITAP33076 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.61□□□□□ -1.67
CIITAP33076 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CIITAP33076 AL512646.1-201ENST00000269395 1077 ntBASIC4.61□□□□□ -1.67
CIITAP33076 SPRR2C-201ENST00000290702 219 ntBASIC4.61□□□□□ -1.67
CIITAP33076 RNU6-984P-201ENST00000363236 109 ntBASIC4.61□□□□□ -1.67
CIITAP33076 RN7SKP227-201ENST00000364445 330 ntBASIC4.61□□□□□ -1.67
CIITAP33076 HSPD1P16-201ENST00000402302 394 ntBASIC4.61□□□□□ -1.67
CIITAP33076 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.61□□□□□ -1.67
CIITAP33076 PGBD4P8-201ENST00000412993 562 ntBASIC4.61□□□□□ -1.67
CIITAP33076 OR51A3P-201ENST00000413596 924 ntBASIC4.61□□□□□ -1.67
CIITAP33076 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 RPL7P4-203ENST00000430239 730 ntBASIC4.61□□□□□ -1.67
CIITAP33076 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.61□□□□□ -1.67
CIITAP33076 MTND3P1-201ENST00000441336 220 ntBASIC4.61□□□□□ -1.67
CIITAP33076 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.61□□□□□ -1.67
CIITAP33076 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 AC104306.1-201ENST00000449702 371 ntBASIC4.61□□□□□ -1.67
CIITAP33076 AL109741.2-201ENST00000455561 343 ntBASIC4.61□□□□□ -1.67
CIITAP33076 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.61□□□□□ -1.67
CIITAP33076 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.61□□□□□ -1.67
CIITAP33076 DYNLL1P6-201ENST00000503440 264 ntBASIC4.61□□□□□ -1.67
CIITAP33076 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.61□□□□□ -1.67
CIITAP33076 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.61□□□□□ -1.67
CIITAP33076 MTND1P22-201ENST00000510572 951 ntBASIC4.61□□□□□ -1.67
CIITAP33076 RNU6-232P-201ENST00000517144 64 ntBASIC4.61□□□□□ -1.67
CIITAP33076 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.61□□□□□ -1.67
CIITAP33076 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.61□□□□□ -1.67
CIITAP33076 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.61□□□□□ -1.67
CIITAP33076 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.61□□□□□ -1.67
CIITAP33076 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.61□□□□□ -1.67
CIITAP33076 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.61□□□□□ -1.67
CIITAP33076 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.61□□□□□ -1.67
CIITAP33076 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.61□□□□□ -1.67
CIITAP33076 AC079171.1-201ENST00000568788 914 ntBASIC4.61□□□□□ -1.67
CIITAP33076 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.61□□□□□ -1.67
CIITAP33076 AC012417.1-201ENST00000582307 1039 ntBASIC4.61□□□□□ -1.67
CIITAP33076 AC090616.2-202ENST00000584248 222 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms