Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 CBX1P4-201ENST00000439415 457 ntBASIC3.59□□□□□ -1.83
SHC1P29353 RPL21P89-201ENST00000444021 467 ntBASIC3.59□□□□□ -1.83
SHC1P29353 ARL5AP2-201ENST00000444698 533 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.59□□□□□ -1.83
SHC1P29353 RPL7P31-201ENST00000450192 724 ntBASIC3.59□□□□□ -1.83
SHC1P29353 NPM1P13-201ENST00000452663 865 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC006511.1-201ENST00000470614 315 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC084024.2-201ENST00000503480 791 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC026726.1-201ENST00000512859 601 ntBASIC3.59□□□□□ -1.83
SHC1P29353 MRPS33P3-201ENST00000513456 322 ntBASIC3.59□□□□□ -1.83
SHC1P29353 RNU6-1129P-201ENST00000515964 104 ntBASIC3.59□□□□□ -1.83
SHC1P29353 snoZ278.1-201ENST00000517059 112 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AP000926.4-201ENST00000527351 454 ntBASIC3.59□□□□□ -1.83
SHC1P29353 MTND2P26-201ENST00000528255 1029 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.59□□□□□ -1.83
SHC1P29353 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
SHC1P29353 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.59□□□□□ -1.83
SHC1P29353 AC090695.1-201ENST00000561269 1222 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC027104.1-201ENST00000563702 681 ntBASIC3.59□□□□□ -1.83
SHC1P29353 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.59□□□□□ -1.83
SHC1P29353 AC091167.4-201ENST00000605079 184 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AL133507.1-201ENST00000605269 557 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC018638.7-201ENST00000605836 1114 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AL355816.1-201ENST00000607951 118 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC092653.1-201ENST00000608509 531 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.59□□□□□ -1.83
SHC1P29353 TUSC7.1-201ENST00000610969 165 ntBASIC3.59□□□□□ -1.83
SHC1P29353 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHC1P29353 MIR6875-201ENST00000617506 72 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC131159.1-201ENST00000621854 213 ntBASIC3.59□□□□□ -1.83
SHC1P29353 MIR6500-201ENST00000622700 86 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AC015726.3-201ENST00000624501 418 ntBASIC3.59□□□□□ -1.83
SHC1P29353 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.59□□□□□ -1.83
SHC1P29353 MIR1322-201ENST00000638013 71 ntBASIC3.59□□□□□ -1.83
SHC1P29353 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHC1P29353 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SHC1P29353 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.59□□□□□ -1.84
SHC1P29353 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.59□□□□□ -1.84
SHC1P29353 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.59□□□□□ -1.84
SHC1P29353 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SHC1P29353 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.59□□□□□ -1.84
SHC1P29353 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SHC1P29353 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SHC1P29353 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.58□□□□□ -1.84
SHC1P29353 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.58□□□□□ -1.84
SHC1P29353 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SHC1P29353 ENSAP3-201ENST00000312710 333 ntBASIC3.58□□□□□ -1.84
SHC1P29353 SNORA62.2-201ENST00000364672 152 ntBASIC3.58□□□□□ -1.84
SHC1P29353 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.58□□□□□ -1.84
SHC1P29353 MIR1302-8-201ENST00000408342 128 ntBASIC3.58□□□□□ -1.84
SHC1P29353 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.58□□□□□ -1.84
SHC1P29353 PTP4A1P5-201ENST00000420305 455 ntBASIC3.58□□□□□ -1.84
SHC1P29353 USP9YP26-201ENST00000421008 661 ntBASIC3.58□□□□□ -1.84
SHC1P29353 IFNNP1-201ENST00000429219 553 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AL365396.1-201ENST00000430854 671 ntBASIC3.58□□□□□ -1.84
SHC1P29353 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
SHC1P29353 KCTD9P3-201ENST00000434597 1169 ntBASIC3.58□□□□□ -1.84
SHC1P29353 HMGB1P45-201ENST00000435986 653 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AL031663.1-201ENST00000437445 219 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AL353093.1-201ENST00000441292 436 ntBASIC3.58□□□□□ -1.84
SHC1P29353 RPS26P30-201ENST00000443431 335 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.58□□□□□ -1.84
SHC1P29353 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.58□□□□□ -1.84
SHC1P29353 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.58□□□□□ -1.84
SHC1P29353 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.58□□□□□ -1.84
SHC1P29353 FABP3P2-201ENST00000453169 399 ntBASIC3.58□□□□□ -1.84
SHC1P29353 RN7SL93P-201ENST00000463035 293 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AC126121.1-201ENST00000482313 553 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AC110792.1-201ENST00000491826 472 ntBASIC3.58□□□□□ -1.84
SHC1P29353 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.58□□□□□ -1.84
SHC1P29353 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.58□□□□□ -1.84
SHC1P29353 MIR2116-201ENST00000517221 80 ntBASIC3.58□□□□□ -1.84
SHC1P29353 RNA5SP179-201ENST00000517284 121 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AC083923.1-201ENST00000523708 376 ntBASIC3.58□□□□□ -1.84
SHC1P29353 MTCO1P47-201ENST00000523889 1271 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.58□□□□□ -1.84
SHC1P29353 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHC1P29353 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.58□□□□□ -1.84
SHC1P29353 YPEL5P3-201ENST00000547227 352 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AC025260.1-201ENST00000548858 430 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AC125611.1-201ENST00000549563 229 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.58□□□□□ -1.84
SHC1P29353 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.58□□□□□ -1.84
SHC1P29353 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.58□□□□□ -1.84
SHC1P29353 MTCO1P40-201ENST00000574371 625 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.58□□□□□ -1.84
SHC1P29353 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHC1P29353 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHC1P29353 VN1R84P-201ENST00000593697 235 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AC110760.3-201ENST00000598794 467 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.58□□□□□ -1.84
SHC1P29353 AL450489.1-201ENST00000612071 468 ntBASIC3.58□□□□□ -1.84
SHC1P29353 OR1S1-201ENST00000624470 978 ntBASIC3.58□□□□□ -1.84
SHC1P29353 AP003072.4-201ENST00000624580 310 ntBASIC3.58□□□□□ -1.84
SHC1P29353 U6.107-201ENST00000637108 79 ntBASIC3.58□□□□□ -1.84
SHC1P29353 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHC1P29353 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.58□□□□□ -1.84
SHC1P29353 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
SHC1P29353 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.58□□□□□ -1.84
SHC1P29353 AC073055.1-201ENST00000456901 1621 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms