Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 RNU6-213P-201ENST00000384051 104 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PTPN4P29074 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PTPN4P29074 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN4P29074 RPL7AP73-201ENST00000413490 353 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 MTCYBP24-201ENST00000420387 1106 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 AL445584.1-201ENST00000431451 330 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN4P29074 AL035246.1-201ENST00000433554 1255 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN4P29074 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN4P29074 AL096829.2-201ENST00000446582 742 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 SEPT14P24-201ENST00000447236 180 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 HMGN2P7-201ENST00000456186 273 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 AC091564.1-201ENST00000464563 479 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 RPL23AP14-201ENST00000468281 468 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 AC022034.3-201ENST00000471393 478 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN4P29074 AL139099.1-201ENST00000497398 403 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN4P29074 TRAV31-201ENST00000502780 342 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN4P29074 TMEM248P1-201ENST00000510579 951 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 USP9YP5-201ENST00000511770 630 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 ARL2BPP6-201ENST00000512757 439 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN4P29074 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN4P29074 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN4P29074 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN4P29074 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.8□□□□□ -1.8
PTPN4P29074 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN4P29074 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN4P29074 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN4P29074 CR392039.5-201ENST00000623201 510 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 AC048347.1-201ENST00000624621 427 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 AC112200.1-201ENST00000625015 234 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.8□□□□□ -1.8
PTPN4P29074 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN4P29074 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PTPN4P29074 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.8□□□□□ -1.8
PTPN4P29074 PABPC1P7-201ENST00000413177 1513 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 RIOK3P1-201ENST00000418778 1528 ntBASIC3.8□□□□□ -1.8
PTPN4P29074 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PTPN4P29074 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
PTPN4P29074 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN4P29074 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN4P29074 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN4P29074 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN4P29074 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN4P29074 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN4P29074 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN4P29074 DSTNP4-201ENST00000399472 474 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 SNORA57.3-201ENST00000411095 141 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN4P29074 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN4P29074 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN4P29074 AL050341.1-201ENST00000447743 313 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 AL358232.1-201ENST00000448030 501 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 AL133547.1-201ENST00000448546 220 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 HMGN3P1-201ENST00000453847 193 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 CDC42P1-201ENST00000456658 548 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN4P29074 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.79□□□□□ -1.8
PTPN4P29074 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.79□□□□□ -1.8
PTPN4P29074 NCOR1P1-202ENST00000486162 291 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN4P29074 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN4P29074 PCBP2P3-201ENST00000509726 843 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN4P29074 SNORA70.14-201ENST00000516205 110 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 RN7SKP60-201ENST00000516985 239 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 IGJP1-201ENST00000522682 475 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 AL139174.1-201ENST00000531489 886 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 OR5D17P-201ENST00000531492 978 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 AC087894.1-201ENST00000538359 518 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN4P29074 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN4P29074 AC091516.1-201ENST00000549191 703 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 AC010735.1-201ENST00000567305 1026 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN4P29074 AC053481.3-201ENST00000577881 843 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.79□□□□□ -1.8
PTPN4P29074 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN4P29074 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.79□□□□□ -1.8
PTPN4P29074 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN4P29074 AC039056.2-201ENST00000622261 511 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.79□□□□□ -1.8
PTPN4P29074 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN4P29074 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.79□□□□□ -1.8
PTPN4P29074 MIR4278-201ENST00000636094 69 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 AL133383.2-201ENST00000622958 2336 ntBASIC3.79□□□□□ -1.8
PTPN4P29074 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN4P29074 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN4P29074 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTPN4P29074 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.78□□□□□ -1.8
PTPN4P29074 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.78□□□□□ -1.8
PTPN4P29074 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PTPN4P29074 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTPN4P29074 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms