Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.36□□□□□ -1.39
RXRBP28702 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC6.36□□□□□ -1.39
RXRBP28702 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.36□□□□□ -1.39
RXRBP28702 MIR3662-201ENST00000637030 95 ntBASIC6.36□□□□□ -1.39
RXRBP28702 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
RXRBP28702 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.36□□□□□ -1.39
RXRBP28702 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.36□□□□□ -1.39
RXRBP28702 AC245100.2-201ENST00000454544 1679 ntBASIC6.36□□□□□ -1.39
RXRBP28702 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.36□□□□□ -1.39
RXRBP28702 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRBP28702 CCT4P2-201ENST00000233836 1548 ntBASIC6.35□□□□□ -1.39
RXRBP28702 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
RXRBP28702 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
RXRBP28702 MTCO1P6-201ENST00000481192 1384 ntBASIC6.35□□□□□ -1.39
RXRBP28702 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 HMGB1P5-201ENST00000255320 642 ntBASIC6.35□□□□□ -1.39
RXRBP28702 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 MIR217-201ENST00000384817 110 ntBASIC6.35□□□□□ -1.39
RXRBP28702 RNU6ATAC-201ENST00000408749 126 ntBASIC6.35□□□□□ -1.39
RXRBP28702 AMD1P2-201ENST00000412936 992 ntBASIC6.35□□□□□ -1.39
RXRBP28702 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.35□□□□□ -1.39
RXRBP28702 USP9YP27-201ENST00000418455 438 ntBASIC6.35□□□□□ -1.39
RXRBP28702 AL034379.1-201ENST00000423216 253 ntBASIC6.35□□□□□ -1.39
RXRBP28702 AL354766.1-201ENST00000423396 542 ntBASIC6.35□□□□□ -1.39
RXRBP28702 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
RXRBP28702 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC6.35□□□□□ -1.39
RXRBP28702 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 SNRPFP4-201ENST00000456366 242 ntBASIC6.35□□□□□ -1.39
RXRBP28702 HSPE1P22-201ENST00000456856 327 ntBASIC6.35□□□□□ -1.39
RXRBP28702 AC091544.1-201ENST00000484702 348 ntBASIC6.35□□□□□ -1.39
RXRBP28702 RPL7P38-201ENST00000488396 739 ntBASIC6.35□□□□□ -1.39
RXRBP28702 AL132838.2-201ENST00000492041 314 ntBASIC6.35□□□□□ -1.39
RXRBP28702 IGBP1P4-201ENST00000503202 879 ntBASIC6.35□□□□□ -1.39
RXRBP28702 NDUFB4P2-201ENST00000509515 391 ntBASIC6.35□□□□□ -1.39
RXRBP28702 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.35□□□□□ -1.39
RXRBP28702 RFPL4AP3-201ENST00000515267 345 ntBASIC6.35□□□□□ -1.39
RXRBP28702 RNY4P37-201ENST00000516225 96 ntBASIC6.35□□□□□ -1.39
RXRBP28702 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 OR6C73P-201ENST00000546432 358 ntBASIC6.35□□□□□ -1.39
RXRBP28702 AC093027.1-201ENST00000546698 429 ntBASIC6.35□□□□□ -1.39
RXRBP28702 MIR3200-201ENST00000580767 85 ntBASIC6.35□□□□□ -1.39
RXRBP28702 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.35□□□□□ -1.39
RXRBP28702 AL390838.2-201ENST00000602394 274 ntBASIC6.35□□□□□ -1.39
RXRBP28702 AC091488.1-201ENST00000604239 660 ntBASIC6.35□□□□□ -1.39
RXRBP28702 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.35□□□□□ -1.39
RXRBP28702 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.35□□□□□ -1.39
RXRBP28702 RNA5SP439-201ENST00000617595 124 ntBASIC6.35□□□□□ -1.39
RXRBP28702 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC6.35□□□□□ -1.39
RXRBP28702 AC083843.2-201ENST00000568248 6253 ntBASIC6.35□□□□□ -1.39
RXRBP28702 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 AC116158.1-201ENST00000560231 2129 ntBASIC6.35□□□□□ -1.39
RXRBP28702 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RXRBP28702 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
RXRBP28702 HSPA8P17-201ENST00000427029 1382 ntBASIC6.34□□□□□ -1.39
RXRBP28702 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
RXRBP28702 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
RXRBP28702 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC6.34□□□□□ -1.39
RXRBP28702 MIR491-201ENST00000384877 84 ntBASIC6.34□□□□□ -1.39
RXRBP28702 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
RXRBP28702 RN7SKP267-201ENST00000410381 285 ntBASIC6.34□□□□□ -1.39
RXRBP28702 AC140479.3-201ENST00000418944 1126 ntBASIC6.34□□□□□ -1.39
RXRBP28702 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.34□□□□□ -1.39
RXRBP28702 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC6.34□□□□□ -1.39
RXRBP28702 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.34□□□□□ -1.39
RXRBP28702 USP24P1-201ENST00000433802 779 ntBASIC6.34□□□□□ -1.39
RXRBP28702 RAD23BP3-201ENST00000454157 1152 ntBASIC6.34□□□□□ -1.39
RXRBP28702 HMGB1P4-201ENST00000455362 567 ntBASIC6.34□□□□□ -1.39
RXRBP28702 AC073522.1-201ENST00000483312 377 ntBASIC6.34□□□□□ -1.39
RXRBP28702 RPL39P36-201ENST00000490784 156 ntBASIC6.34□□□□□ -1.39
RXRBP28702 SETP14-201ENST00000497538 873 ntBASIC6.34□□□□□ -1.39
RXRBP28702 AC091868.1-201ENST00000508746 304 ntBASIC6.34□□□□□ -1.39
RXRBP28702 MTCYBP43-201ENST00000513621 740 ntBASIC6.34□□□□□ -1.39
RXRBP28702 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.34□□□□□ -1.39
RXRBP28702 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.34□□□□□ -1.39
RXRBP28702 HNRNPCP4-201ENST00000571636 900 ntBASIC6.34□□□□□ -1.39
RXRBP28702 AC136618.2-201ENST00000575091 400 ntBASIC6.34□□□□□ -1.39
RXRBP28702 RN7SL802P-201ENST00000577858 299 ntBASIC6.34□□□□□ -1.39
RXRBP28702 AC010200.2-201ENST00000605098 235 ntBASIC6.34□□□□□ -1.39
RXRBP28702 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC6.34□□□□□ -1.39
RXRBP28702 AC039056.2-201ENST00000622261 511 ntBASIC6.34□□□□□ -1.39
RXRBP28702 AC068880.5-201ENST00000624331 290 ntBASIC6.34□□□□□ -1.39
RXRBP28702 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.34□□□□□ -1.39
RXRBP28702 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RXRBP28702 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
RXRBP28702 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RXRBP28702 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RXRBP28702 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RXRBP28702 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.34□□□□□ -1.39
RXRBP28702 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.34□□□□□ -1.39
RXRBP28702 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms