Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RN7SL504P-201ENST00000494496 287 ntBASIC2.79□□□□□ -1.96
COL8A2P25067 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.79□□□□□ -1.96
COL8A2P25067 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.79□□□□□ -1.96
COL8A2P25067 HMGB1P47-201ENST00000511281 589 ntBASIC2.79□□□□□ -1.96
COL8A2P25067 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
COL8A2P25067 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.79□□□□□ -1.96
COL8A2P25067 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.79□□□□□ -1.96
COL8A2P25067 OR4A2P-201ENST00000527276 913 ntBASIC2.79□□□□□ -1.96
COL8A2P25067 AL389895.1-201ENST00000554127 252 ntBASIC2.79□□□□□ -1.96
COL8A2P25067 AC005476.1-201ENST00000554427 397 ntBASIC2.79□□□□□ -1.96
COL8A2P25067 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.79□□□□□ -1.96
COL8A2P25067 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.79□□□□□ -1.96
COL8A2P25067 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.79□□□□□ -1.96
COL8A2P25067 AC008507.1-201ENST00000587506 734 ntBASIC2.79□□□□□ -1.96
COL8A2P25067 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.79□□□□□ -1.96
COL8A2P25067 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.79□□□□□ -1.96
COL8A2P25067 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.79□□□□□ -1.96
COL8A2P25067 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC2.79□□□□□ -1.96
COL8A2P25067 AC009464.1-201ENST00000615731 469 ntBASIC2.79□□□□□ -1.96
COL8A2P25067 MIR8057-201ENST00000620957 69 ntBASIC2.79□□□□□ -1.96
COL8A2P25067 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.79□□□□□ -1.96
COL8A2P25067 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.79□□□□□ -1.96
COL8A2P25067 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.79□□□□□ -1.96
COL8A2P25067 AC015726.3-201ENST00000624501 418 ntBASIC2.79□□□□□ -1.96
COL8A2P25067 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
COL8A2P25067 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.79□□□□□ -1.96
COL8A2P25067 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL8A2P25067 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
COL8A2P25067 AC090229.1-201ENST00000590983 1609 ntBASIC2.79□□□□□ -1.96
COL8A2P25067 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
COL8A2P25067 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.78□□□□□ -1.96
COL8A2P25067 EI24P2-201ENST00000397776 1076 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.78□□□□□ -1.96
COL8A2P25067 AL356968.1-201ENST00000416622 474 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 RPS12P23-201ENST00000419579 400 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 ZFAND6P1-201ENST00000434138 605 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC2.78□□□□□ -1.96
COL8A2P25067 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.78□□□□□ -1.96
COL8A2P25067 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.78□□□□□ -1.96
COL8A2P25067 CYCSP32-201ENST00000440548 321 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 AL353093.1-201ENST00000441292 436 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.78□□□□□ -1.96
COL8A2P25067 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.78□□□□□ -1.96
COL8A2P25067 RPL12P26-201ENST00000452430 487 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 AC006539.3-201ENST00000454258 129 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 RPL5P24-201ENST00000463742 885 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 SETP6-201ENST00000479329 568 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 ACTG1P13-201ENST00000486987 1043 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 AC090543.1-201ENST00000492168 485 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 FABP5P6-201ENST00000510588 409 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.78□□□□□ -1.96
COL8A2P25067 AC023141.12-201ENST00000512399 199 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.78□□□□□ -1.96
COL8A2P25067 MTND5P21-201ENST00000531961 522 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 HIGD1AP1-201ENST00000550979 275 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 RPL21P12-201ENST00000559810 515 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 AC106785.3-201ENST00000564064 847 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 VN1R84P-201ENST00000593697 235 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 MIMT1-201ENST00000597105 1050 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 AP003117.1-201ENST00000602771 554 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 AC006254.3-201ENST00000603353 884 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
COL8A2P25067 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
COL8A2P25067 AC093908.1-201ENST00000623125 8092 ntBASIC2.78□□□□□ -1.96
COL8A2P25067 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.78□□□□□ -1.96
COL8A2P25067 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
COL8A2P25067 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
COL8A2P25067 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.97
COL8A2P25067 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL8A2P25067 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL8A2P25067 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.77□□□□□ -1.97
COL8A2P25067 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL8A2P25067 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
COL8A2P25067 MTND4P11-201ENST00000417020 1058 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC2.77□□□□□ -1.97
COL8A2P25067 MTATP6P11-201ENST00000428071 670 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC2.77□□□□□ -1.97
COL8A2P25067 BX679664.1-201ENST00000434429 253 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 AL031663.1-201ENST00000437445 219 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 MTCO3P43-201ENST00000440974 771 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 Z99127.2-201ENST00000441426 334 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.77□□□□□ -1.97
COL8A2P25067 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.77□□□□□ -1.97
COL8A2P25067 RPL23AP67-201ENST00000465341 474 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 PDLIM1P4-201ENST00000504327 1006 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 AC110794.1-201ENST00000505816 425 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.77□□□□□ -1.97
COL8A2P25067 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.77□□□□□ -1.97
COL8A2P25067 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.77□□□□□ -1.97
COL8A2P25067 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
COL8A2P25067 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC2.77□□□□□ -1.97
COL8A2P25067 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC2.77□□□□□ -1.97
COL8A2P25067 AC025260.1-201ENST00000548858 430 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.77□□□□□ -1.97
COL8A2P25067 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.77□□□□□ -1.97
COL8A2P25067 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.77□□□□□ -1.97
COL8A2P25067 AC012493.2-201ENST00000595083 291 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 AL365400.2-201ENST00000605604 902 ntBASIC2.77□□□□□ -1.97
COL8A2P25067 uc_338.1-201ENST00000612113 180 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms