Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RPS7P7-201ENST00000463499 571 ntBASIC4.47□□□□□ -1.69
BDNFP23560 ST13P14-201ENST00000474095 734 ntBASIC4.47□□□□□ -1.69
BDNFP23560 RPS29P19-201ENST00000479709 171 ntBASIC4.47□□□□□ -1.69
BDNFP23560 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.47□□□□□ -1.69
BDNFP23560 AC021146.1-201ENST00000511202 716 ntBASIC4.47□□□□□ -1.69
BDNFP23560 AC026412.2-201ENST00000512270 1075 ntBASIC4.47□□□□□ -1.69
BDNFP23560 RNA5SP315-201ENST00000516340 116 ntBASIC4.47□□□□□ -1.69
BDNFP23560 RNA5SP312-201ENST00000517068 116 ntBASIC4.47□□□□□ -1.69
BDNFP23560 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.47□□□□□ -1.69
BDNFP23560 AL139174.1-201ENST00000531489 886 ntBASIC4.47□□□□□ -1.69
BDNFP23560 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC4.47□□□□□ -1.69
BDNFP23560 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.47□□□□□ -1.69
BDNFP23560 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.47□□□□□ -1.69
BDNFP23560 AC008759.1-201ENST00000589783 983 ntBASIC4.47□□□□□ -1.69
BDNFP23560 SLC25A36P1-201ENST00000590111 465 ntBASIC4.47□□□□□ -1.69
BDNFP23560 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.47□□□□□ -1.69
BDNFP23560 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.47□□□□□ -1.69
BDNFP23560 AC068790.5-201ENST00000602741 355 ntBASIC4.47□□□□□ -1.69
BDNFP23560 ZYXP1-201ENST00000617638 118 ntBASIC4.47□□□□□ -1.69
BDNFP23560 MIR492-201ENST00000638676 116 ntBASIC4.47□□□□□ -1.69
BDNFP23560 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.47□□□□□ -1.69
BDNFP23560 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
BDNFP23560 AC091152.2-201ENST00000591628 2569 ntBASIC4.47□□□□□ -1.69
BDNFP23560 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
BDNFP23560 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.46□□□□□ -1.69
BDNFP23560 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
BDNFP23560 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BDNFP23560 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
BDNFP23560 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
BDNFP23560 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
BDNFP23560 RNA5SP372-201ENST00000390836 115 ntBASIC4.46□□□□□ -1.7
BDNFP23560 HDGFP1-201ENST00000405943 252 ntBASIC4.46□□□□□ -1.7
BDNFP23560 AL161631.1-201ENST00000417933 486 ntBASIC4.46□□□□□ -1.7
BDNFP23560 UBTFL3-201ENST00000418934 1024 ntBASIC4.46□□□□□ -1.7
BDNFP23560 AC007435.1-201ENST00000421086 415 ntBASIC4.46□□□□□ -1.7
BDNFP23560 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.46□□□□□ -1.7
BDNFP23560 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.46□□□□□ -1.7
BDNFP23560 DUTP6-201ENST00000425573 462 ntBASIC4.46□□□□□ -1.7
BDNFP23560 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
BDNFP23560 OR4C10P-201ENST00000434991 931 ntBASIC4.46□□□□□ -1.7
BDNFP23560 MTND4LP10-201ENST00000435146 291 ntBASIC4.46□□□□□ -1.7
BDNFP23560 AL121871.1-201ENST00000443413 436 ntBASIC4.46□□□□□ -1.7
BDNFP23560 ABCF2P2-201ENST00000450549 296 ntBASIC4.46□□□□□ -1.7
BDNFP23560 UBTFL6-201ENST00000477929 1024 ntBASIC4.46□□□□□ -1.7
BDNFP23560 AC109458.1-201ENST00000508858 316 ntBASIC4.46□□□□□ -1.7
BDNFP23560 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.46□□□□□ -1.7
BDNFP23560 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.46□□□□□ -1.7
BDNFP23560 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.46□□□□□ -1.7
BDNFP23560 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.46□□□□□ -1.7
BDNFP23560 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.46□□□□□ -1.7
BDNFP23560 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.7
BDNFP23560 AC105233.3-201ENST00000531125 744 ntBASIC4.46□□□□□ -1.7
BDNFP23560 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.46□□□□□ -1.7
BDNFP23560 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.46□□□□□ -1.7
BDNFP23560 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.46□□□□□ -1.7
BDNFP23560 AC126177.3-201ENST00000551839 688 ntBASIC4.46□□□□□ -1.7
BDNFP23560 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.46□□□□□ -1.7
BDNFP23560 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.46□□□□□ -1.7
BDNFP23560 AC009101.1-201ENST00000568135 242 ntBASIC4.46□□□□□ -1.7
BDNFP23560 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.46□□□□□ -1.7
BDNFP23560 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.46□□□□□ -1.7
BDNFP23560 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.46□□□□□ -1.7
BDNFP23560 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.46□□□□□ -1.7
BDNFP23560 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
BDNFP23560 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.7
BDNFP23560 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BDNFP23560 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BDNFP23560 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
BDNFP23560 AC107982.1-201ENST00000507171 1300 ntBASIC4.46□□□□□ -1.7
BDNFP23560 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.45□□□□□ -1.7
BDNFP23560 AL031985.3-201ENST00000565390 2449 ntBASIC4.45□□□□□ -1.7
BDNFP23560 AC007256.1-201ENST00000392253 2765 ntBASIC4.45□□□□□ -1.7
BDNFP23560 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BDNFP23560 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
BDNFP23560 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
BDNFP23560 RNU1-13P-201ENST00000384499 162 ntBASIC4.45□□□□□ -1.7
BDNFP23560 AL356967.1-201ENST00000406305 431 ntBASIC4.45□□□□□ -1.7
BDNFP23560 RN7SKP33-201ENST00000410942 340 ntBASIC4.45□□□□□ -1.7
BDNFP23560 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.45□□□□□ -1.7
BDNFP23560 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.45□□□□□ -1.7
BDNFP23560 AC007390.1-201ENST00000415722 356 ntBASIC4.45□□□□□ -1.7
BDNFP23560 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.45□□□□□ -1.7
BDNFP23560 RPL7P28-201ENST00000437739 740 ntBASIC4.45□□□□□ -1.7
BDNFP23560 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.45□□□□□ -1.7
BDNFP23560 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.45□□□□□ -1.7
BDNFP23560 AC108941.1-201ENST00000502853 530 ntBASIC4.45□□□□□ -1.7
BDNFP23560 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.45□□□□□ -1.7
BDNFP23560 AC105914.1-201ENST00000511798 226 ntBASIC4.45□□□□□ -1.7
BDNFP23560 RNU6-27P-201ENST00000516146 107 ntBASIC4.45□□□□□ -1.7
BDNFP23560 AC087808.1-201ENST00000520501 361 ntBASIC4.45□□□□□ -1.7
BDNFP23560 PHBP17-201ENST00000528576 541 ntBASIC4.45□□□□□ -1.7
BDNFP23560 AC118942.1-201ENST00000529674 1035 ntBASIC4.45□□□□□ -1.7
BDNFP23560 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.45□□□□□ -1.7
BDNFP23560 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.45□□□□□ -1.7
BDNFP23560 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.45□□□□□ -1.7
BDNFP23560 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.45□□□□□ -1.7
BDNFP23560 AC087481.2-201ENST00000565492 330 ntBASIC4.45□□□□□ -1.7
BDNFP23560 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.45□□□□□ -1.7
BDNFP23560 AC138915.2-201ENST00000569776 97 ntBASIC4.45□□□□□ -1.7
BDNFP23560 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms