Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MIR22-201ENST00000362190 85 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 BMS1P22-201ENST00000414726 313 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.96□□□□□ -1.94
COL5A1P20908 AC244033.1-201ENST00000426826 870 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.96□□□□□ -1.94
COL5A1P20908 RPL23AP22-201ENST00000437556 453 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 AC016696.1-201ENST00000446949 318 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 OR7L1P-201ENST00000456181 380 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 AL136097.1-201ENST00000456945 913 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 AL049829.1-201ENST00000465411 156 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.96□□□□□ -1.94
COL5A1P20908 AC117440.1-201ENST00000474107 571 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL5A1P20908 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.96□□□□□ -1.94
COL5A1P20908 ELOCP29-201ENST00000588193 334 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC2.96□□□□□ -1.94
COL5A1P20908 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.96□□□□□ -1.94
COL5A1P20908 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
COL5A1P20908 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL5A1P20908 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
COL5A1P20908 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL5A1P20908 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.96□□□□□ -1.94
COL5A1P20908 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
COL5A1P20908 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL5A1P20908 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
COL5A1P20908 U3.12-201ENST00000364498 214 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL5A1P20908 AC240504.1-201ENST00000395709 845 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.96□□□□□ -1.94
COL5A1P20908 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.96□□□□□ -1.94
COL5A1P20908 HMGB1P18-201ENST00000438801 619 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.96□□□□□ -1.94
COL5A1P20908 RPS17P11-201ENST00000474297 293 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.96□□□□□ -1.94
COL5A1P20908 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.96□□□□□ -1.94
COL5A1P20908 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.96□□□□□ -1.94
COL5A1P20908 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
COL5A1P20908 AC008676.3-201ENST00000521237 435 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.96□□□□□ -1.94
COL5A1P20908 AC009101.1-201ENST00000568135 242 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.96□□□□□ -1.94
COL5A1P20908 AC015871.2-201ENST00000603605 948 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 AC087468.1-201ENST00000604365 630 ntBASIC2.96□□□□□ -1.94
COL5A1P20908 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
COL5A1P20908 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
COL5A1P20908 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL5A1P20908 MTCO1P8-201ENST00000416914 1523 ntBASIC2.95□□□□□ -1.94
COL5A1P20908 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.95□□□□□ -1.94
COL5A1P20908 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL5A1P20908 RNU1-75P-201ENST00000347264 129 ntBASIC2.95□□□□□ -1.94
COL5A1P20908 OR13C3-201ENST00000374781 1108 ntBASIC2.95□□□□□ -1.94
COL5A1P20908 SNORA81-201ENST00000408493 178 ntBASIC2.95□□□□□ -1.94
COL5A1P20908 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.95□□□□□ -1.94
COL5A1P20908 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC2.95□□□□□ -1.94
COL5A1P20908 RPL32P35-201ENST00000415214 394 ntBASIC2.95□□□□□ -1.94
COL5A1P20908 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.95□□□□□ -1.94
COL5A1P20908 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.95□□□□□ -1.94
COL5A1P20908 IPMKP1-201ENST00000425988 855 ntBASIC2.95□□□□□ -1.94
COL5A1P20908 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.95□□□□□ -1.94
COL5A1P20908 AC108938.1-201ENST00000451204 136 ntBASIC2.95□□□□□ -1.94
COL5A1P20908 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.95□□□□□ -1.94
COL5A1P20908 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC2.95□□□□□ -1.94
COL5A1P20908 SETP12-201ENST00000514068 805 ntBASIC2.95□□□□□ -1.94
COL5A1P20908 Y_RNA.676-201ENST00000516393 96 ntBASIC2.95□□□□□ -1.94
COL5A1P20908 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC2.95□□□□□ -1.94
COL5A1P20908 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.95□□□□□ -1.94
COL5A1P20908 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
COL5A1P20908 AC006213.5-201ENST00000619673 288 ntBASIC2.95□□□□□ -1.94
COL5A1P20908 AP000720.1-201ENST00000625091 483 ntBASIC2.95□□□□□ -1.94
COL5A1P20908 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
COL5A1P20908 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.95□□□□□ -1.94
COL5A1P20908 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
COL5A1P20908 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
COL5A1P20908 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
COL5A1P20908 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC2.95□□□□□ -1.94
COL5A1P20908 AL606537.1-201ENST00000607258 2011 ntBASIC2.94□□□□□ -1.94
COL5A1P20908 U3.11-201ENST00000364476 212 ntBASIC2.94□□□□□ -1.94
COL5A1P20908 RSL24D1P4-201ENST00000400938 484 ntBASIC2.94□□□□□ -1.94
COL5A1P20908 AL583834.1-201ENST00000406943 343 ntBASIC2.94□□□□□ -1.94
COL5A1P20908 AL592148.1-201ENST00000413568 445 ntBASIC2.94□□□□□ -1.94
COL5A1P20908 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.94□□□□□ -1.94
COL5A1P20908 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.94□□□□□ -1.94
COL5A1P20908 AC004801.2-202ENST00000463559 283 ntBASIC2.94□□□□□ -1.94
COL5A1P20908 CYCSP20-201ENST00000473154 315 ntBASIC2.94□□□□□ -1.94
COL5A1P20908 AC108078.3-201ENST00000502633 489 ntBASIC2.94□□□□□ -1.94
COL5A1P20908 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.94□□□□□ -1.94
COL5A1P20908 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC2.94□□□□□ -1.94
COL5A1P20908 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.94□□□□□ -1.94
COL5A1P20908 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.94□□□□□ -1.94
COL5A1P20908 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.94□□□□□ -1.94
COL5A1P20908 EIF1AXP2-201ENST00000555940 413 ntBASIC2.94□□□□□ -1.94
COL5A1P20908 PRELID3BP8-201ENST00000604148 295 ntBASIC2.94□□□□□ -1.94
COL5A1P20908 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.94□□□□□ -1.94
COL5A1P20908 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.94□□□□□ -1.94
COL5A1P20908 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
COL5A1P20908 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
COL5A1P20908 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COL5A1P20908 AC093311.1-201ENST00000506586 2021 ntBASIC2.94□□□□□ -1.94
COL5A1P20908 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.94□□□□□ -1.94
COL5A1P20908 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms