Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL159972.1-201ENST00000625150 448 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.92□□□□□ -1.46
NFKB1P19838 OR52H1-202ENST00000641796 1061 ntBASIC5.92□□□□□ -1.46
NFKB1P19838 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
NFKB1P19838 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.92□□□□□ -1.46
NFKB1P19838 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NFKB1P19838 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NFKB1P19838 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
NFKB1P19838 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 CAP1P2-201ENST00000417455 1409 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 ANKRD26P2-201ENST00000445530 1710 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
NFKB1P19838 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 AC004158.1-201ENST00000564508 4319 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 AC011460.1-201ENST00000636268 1834 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 RNA5SP477-201ENST00000362639 119 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 RNA5SP500-201ENST00000364486 119 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 RN7SKP187-201ENST00000365536 330 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 RNY3P13-201ENST00000365542 102 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.91□□□□□ -1.46
NFKB1P19838 U3.20-201ENST00000390909 217 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AC004386.1-201ENST00000393214 761 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 DSTNP4-201ENST00000399472 474 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 HMGB3P7-201ENST00000400214 611 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AL024474.1-201ENST00000404655 591 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 RPS4XP9-201ENST00000405151 780 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AC099535.1-201ENST00000408928 371 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.91□□□□□ -1.46
NFKB1P19838 MED13P1-201ENST00000428342 171 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AC110602.1-201ENST00000437414 318 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 YWHAEP1-201ENST00000453697 763 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AL122020.1-201ENST00000472287 459 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.91□□□□□ -1.46
NFKB1P19838 AC025458.1-201ENST00000506046 166 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.91□□□□□ -1.46
NFKB1P19838 AC105384.2-201ENST00000508433 640 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.91□□□□□ -1.46
NFKB1P19838 AC018797.3-201ENST00000513388 1241 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 Y_RNA.667-201ENST00000516212 107 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 RNA5SP438-201ENST00000516561 112 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 IGKV2-19-201ENST00000518132 283 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.91□□□□□ -1.46
NFKB1P19838 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.91□□□□□ -1.46
NFKB1P19838 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.91□□□□□ -1.46
NFKB1P19838 MIR4433B-201ENST00000581329 102 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AC060771.1-201ENST00000582031 164 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.91□□□□□ -1.46
NFKB1P19838 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.91□□□□□ -1.46
NFKB1P19838 AC060780.2-201ENST00000589047 198 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 RPL12P48-201ENST00000605620 304 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AL157817.1-201ENST00000614264 790 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 AC024884.1-201ENST00000620583 399 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.91□□□□□ -1.46
NFKB1P19838 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 AC121333.1-201ENST00000567488 2709 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.91□□□□□ -1.46
NFKB1P19838 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.91□□□□□ -1.46
NFKB1P19838 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 TAB3P1-202ENST00000452645 1634 ntBASIC5.91□□□□□ -1.46
NFKB1P19838 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
NFKB1P19838 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
NFKB1P19838 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.91□□□□□ -1.46
NFKB1P19838 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
NFKB1P19838 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
NFKB1P19838 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NFKB1P19838 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.9□□□□□ -1.46
NFKB1P19838 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NFKB1P19838 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
NFKB1P19838 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
NFKB1P19838 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.9□□□□□ -1.46
NFKB1P19838 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NFKB1P19838 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.9□□□□□ -1.46
NFKB1P19838 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NFKB1P19838 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NFKB1P19838 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NFKB1P19838 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NFKB1P19838 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.9□□□□□ -1.46
NFKB1P19838 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.9□□□□□ -1.46
NFKB1P19838 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
NFKB1P19838 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NFKB1P19838 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
NFKB1P19838 Y_RNA.5-201ENST00000362334 102 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 RNU6-1115P-201ENST00000362490 106 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 RNA5SP91-201ENST00000390902 119 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NFKB1P19838 SSXP10-201ENST00000402595 565 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AL139397.2-201ENST00000404529 772 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms