Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC073073.1-201ENST00000493920 463 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 RN7SL447P-201ENST00000494711 245 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.15□□□□□ -1.59
COL6A2P12110 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.15□□□□□ -1.59
COL6A2P12110 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.15□□□□□ -1.59
COL6A2P12110 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.15□□□□□ -1.59
COL6A2P12110 Y_RNA.704-201ENST00000516851 102 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 RNU6-714P-201ENST00000516963 103 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 RNA5SP373-201ENST00000517271 95 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.15□□□□□ -1.59
COL6A2P12110 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.15□□□□□ -1.59
COL6A2P12110 OR4R3P-201ENST00000525084 838 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.15□□□□□ -1.59
COL6A2P12110 AC027544.3-201ENST00000535082 757 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.15□□□□□ -1.59
COL6A2P12110 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL6A2P12110 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.15□□□□□ -1.59
COL6A2P12110 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
COL6A2P12110 AL117336.2-201ENST00000602435 335 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AP001330.5-201ENST00000607176 411 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 Y_RNA.804-201ENST00000615262 101 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AC127024.6-201ENST00000621598 424 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL6A2P12110 AL450345.1-202ENST00000605741 3881 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL6A2P12110 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL6A2P12110 SMG1P6-201ENST00000532337 2930 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL6A2P12110 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.15□□□□□ -1.59
COL6A2P12110 MTND4P29-201ENST00000503122 1372 ntBASIC5.15□□□□□ -1.59
COL6A2P12110 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL6A2P12110 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL6A2P12110 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.14□□□□□ -1.59
COL6A2P12110 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL6A2P12110 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL6A2P12110 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL6A2P12110 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL6A2P12110 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL6A2P12110 AC092747.4-201ENST00000620519 1861 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.14□□□□□ -1.59
COL6A2P12110 MTND5P28-201ENST00000438005 1594 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.14□□□□□ -1.59
COL6A2P12110 FRG1BP-201ENST00000278882 761 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 Y_RNA.813-201ENST00000364639 102 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 RNU6-877P-201ENST00000383868 107 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 MIR105-1-201ENST00000385222 81 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
COL6A2P12110 SNORA17A-201ENST00000391185 133 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 RPL23AP32-201ENST00000395315 459 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
COL6A2P12110 AL049693.1-201ENST00000402760 611 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AL024474.1-201ENST00000404655 591 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AL603766.1-201ENST00000407763 664 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 RNA5SP178-201ENST00000410380 128 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 RN7SKP206-201ENST00000410823 293 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.14□□□□□ -1.59
COL6A2P12110 RPL21P111-201ENST00000418453 477 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.14□□□□□ -1.59
COL6A2P12110 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 AL161636.2-201ENST00000445179 927 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AC114755.5-201ENST00000447760 831 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 TCEA1P1-201ENST00000449716 880 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.14□□□□□ -1.59
COL6A2P12110 AC087879.1-201ENST00000474343 374 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AP001025.2-201ENST00000490908 477 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AC097173.1-201ENST00000505862 819 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AC002456.2-201ENST00000509356 380 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 RNU6-445P-201ENST00000516949 107 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.14□□□□□ -1.59
COL6A2P12110 AF235103.2-201ENST00000525753 346 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 RAB11AP2-201ENST00000545905 639 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.14□□□□□ -1.59
COL6A2P12110 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.14□□□□□ -1.59
COL6A2P12110 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.14□□□□□ -1.59
COL6A2P12110 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.14□□□□□ -1.59
COL6A2P12110 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL6A2P12110 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 RPL23AP92-201ENST00000603609 255 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 FO393422.1-201ENST00000603908 708 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AC112230.1-201ENST00000604342 547 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 AL161734.1-201ENST00000609720 557 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.14□□□□□ -1.59
COL6A2P12110 BX664608.1-201ENST00000610519 487 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL6A2P12110 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL6A2P12110 AC009159.1-201ENST00000618386 642 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL6A2P12110 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AL732618.1-201ENST00000623251 301 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AP006248.2-201ENST00000623309 592 ntBASIC5.14□□□□□ -1.59
COL6A2P12110 AC009033.1-201ENST00000624279 431 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms