Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 AL359837.1-201ENST00000381357 287 ntBASIC3.68□□□□□ -1.82
CCDC172P0C7W6 SNORA11B-201ENST00000408175 129 ntBASIC3.68□□□□□ -1.82
CCDC172P0C7W6 HMGB3P23-201ENST00000414981 585 ntBASIC3.68□□□□□ -1.82
CCDC172P0C7W6 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 AL356968.1-201ENST00000416622 474 ntBASIC3.68□□□□□ -1.82
CCDC172P0C7W6 RPS15AP40-201ENST00000419621 391 ntBASIC3.68□□□□□ -1.82
CCDC172P0C7W6 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 GLRXP1-201ENST00000423261 334 ntBASIC3.68□□□□□ -1.82
CCDC172P0C7W6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 TRIM60P18-201ENST00000441518 828 ntBASIC3.68□□□□□ -1.82
CCDC172P0C7W6 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC172P0C7W6 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC093908.1-201ENST00000623125 8092 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 RNU4-23P-201ENST00000362839 140 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 RNU2-65P-201ENST00000410162 185 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 RNU2-6P-201ENST00000411404 190 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC091390.1-201ENST00000433904 331 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 YWHAZP7-201ENST00000436906 631 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 HMGN1P18-201ENST00000457642 277 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 RPL23AP55-201ENST00000498163 452 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 MTND4LP31-201ENST00000514859 294 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 SNORA70.18-201ENST00000516696 98 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC103843.2-201ENST00000530523 682 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC074029.2-201ENST00000551045 634 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC009268.1-201ENST00000561352 1203 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC010653.1-201ENST00000571108 881 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 MIR4697-201ENST00000582977 78 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 HMGN2P28-201ENST00000606102 262 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AL392088.2-201ENST00000637607 285 ntBASIC3.67□□□□□ -1.82
CCDC172P0C7W6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC172P0C7W6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 U8.9-201ENST00000365667 134 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 SNORA57.1-201ENST00000391227 145 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 SNORA26.7-201ENST00000391288 122 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 MIR887-201ENST00000401258 79 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 Z99755.1-201ENST00000414048 380 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 NUP35P2-201ENST00000416748 943 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 DBIP2-201ENST00000419076 262 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 AC012065.2-201ENST00000421295 375 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 BX276092.4-201ENST00000452056 248 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 AP002345.1-201ENST00000456493 928 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 AC112198.1-201ENST00000505369 1220 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 FCF1P8-201ENST00000510322 597 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 SNORA64.4-201ENST00000516632 81 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 MIR2276-201ENST00000516886 89 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 MIMT1-201ENST00000597105 1050 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 AL365440.1-201ENST00000436135 2167 ntBASIC3.66□□□□□ -1.82
CCDC172P0C7W6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC172P0C7W6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms