Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AP006245.1-201ENST00000522549 120 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC4P09017 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.44□□□□□ -1.86
HOXC4P09017 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC4P09017 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC4P09017 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC4P09017 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC4P09017 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC4P09017 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC4P09017 AC006557.5-201ENST00000603126 811 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC4P09017 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC4P09017 AL163051.2-201ENST00000618976 735 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 AL049777.1-201ENST00000622740 518 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 AC004943.3-201ENST00000624116 600 ntBASIC3.44□□□□□ -1.86
HOXC4P09017 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
HOXC4P09017 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HOXC4P09017 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC4P09017 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC4P09017 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC4P09017 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC4P09017 MTND5P1-201ENST00000445440 1375 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC4P09017 RNU1-18P-201ENST00000363062 164 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC4P09017 RNU6-925P-201ENST00000384629 104 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AL353692.2-201ENST00000407054 335 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 MTND4P22-201ENST00000413116 1169 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AC127526.1-201ENST00000417526 366 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AC234782.4-201ENST00000417646 1048 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 KRR1P1-201ENST00000419430 803 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.43□□□□□ -1.86
HOXC4P09017 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC4P09017 MTND2P21-201ENST00000436242 1042 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC4P09017 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC4P09017 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC4P09017 AC007967.1-201ENST00000455422 1159 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 FCF1P6-201ENST00000456841 595 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 RPL9P32-201ENST00000464118 620 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 PLGLA-201ENST00000465668 449 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AP000563.1-201ENST00000490865 758 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AC093663.1-201ENST00000497190 394 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AC093801.2-201ENST00000503966 1050 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AC016550.1-201ENST00000505348 785 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AC110760.3-202ENST00000515177 371 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 IGKV2-26-201ENST00000518305 343 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXC4P09017 AC026333.2-201ENST00000542164 106 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 POLR2KP1-201ENST00000553226 168 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 DUXAP6-201ENST00000553858 601 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AL121594.4-201ENST00000556211 1196 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AC079148.1-201ENST00000565944 819 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXC4P09017 SUMO2P14-201ENST00000604488 293 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AC120053.1-201ENST00000607706 736 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HOXC4P09017 AC243756.2-201ENST00000618406 463 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC4P09017 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC4P09017 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HOXC4P09017 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC4P09017 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXC4P09017 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC4P09017 HSPA8P19-201ENST00000505359 1517 ntBASIC3.43□□□□□ -1.86
HOXC4P09017 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC4P09017 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC4P09017 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC4P09017 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC4P09017 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC4P09017 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC4P09017 SNORA63.3-201ENST00000362682 132 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 RNU6-283P-201ENST00000364788 107 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC4P09017 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
HOXC4P09017 RNVU1-14-201ENST00000384770 164 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 MTCO3P31-201ENST00000405526 789 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 AC017079.2-201ENST00000416102 485 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 SFR1P2-201ENST00000421841 730 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC4P09017 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC4P09017 AL645638.1-201ENST00000440519 361 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC4P09017 XKRY2-201ENST00000442362 1093 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.42□□□□□ -1.86
HOXC4P09017 HMGN1P5-201ENST00000448591 263 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 TVP23BP2-201ENST00000455082 615 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 CFTRP1-201ENST00000456646 183 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC4P09017 AC008155.2-201ENST00000464337 397 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 RPL23AP14-201ENST00000468281 468 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 RN7SL601P-201ENST00000471221 293 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 AC084357.1-201ENST00000473404 255 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 AC025518.1-201ENST00000479856 347 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.42□□□□□ -1.86
HOXC4P09017 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.42□□□□□ -1.86
HOXC4P09017 MTATP6P9-201ENST00000515039 680 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 AC112198.4-201ENST00000515450 351 ntBASIC3.42□□□□□ -1.86
HOXC4P09017 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms