Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC1.78□□□□□ -2.13
APOBP04114 IGHV3-63-201ENST00000518422 341 ntBASIC1.78□□□□□ -2.13
APOBP04114 MIR1273D-201ENST00000577266 86 ntBASIC1.78□□□□□ -2.13
APOBP04114 ALG13-230ENST00000623189 458 ntTSL 3 BASIC1.78□□□□□ -2.13
APOBP04114 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
APOBP04114 CEP170P1-201ENST00000502249 4587 ntBASIC1.77□□□□□ -2.13
APOBP04114 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC1.77□□□□□ -2.13
APOBP04114 FAM133CP-201ENST00000332869 704 ntBASIC1.77□□□□□ -2.13
APOBP04114 HMGB3P18-201ENST00000406327 590 ntBASIC1.77□□□□□ -2.13
APOBP04114 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC1.77□□□□□ -2.13
APOBP04114 AC078785.3-201ENST00000476607 425 ntBASIC1.77□□□□□ -2.13
APOBP04114 AC126121.1-201ENST00000482313 553 ntBASIC1.77□□□□□ -2.13
APOBP04114 AC108078.3-201ENST00000502633 489 ntBASIC1.77□□□□□ -2.13
APOBP04114 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC1.77□□□□□ -2.13
APOBP04114 AP001646.1-201ENST00000527936 915 ntBASIC1.77□□□□□ -2.13
APOBP04114 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
APOBP04114 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
APOBP04114 Y_RNA.4-201ENST00000362333 112 ntBASIC1.77□□□□□ -2.13
APOBP04114 U8.2-201ENST00000363156 134 ntBASIC1.77□□□□□ -2.13
APOBP04114 RPL32P35-201ENST00000415214 394 ntBASIC1.77□□□□□ -2.13
APOBP04114 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC1.77□□□□□ -2.13
APOBP04114 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
APOBP04114 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC1.77□□□□□ -2.13
APOBP04114 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.77□□□□□ -2.13
APOBP04114 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.77□□□□□ -2.13
APOBP04114 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC1.77□□□□□ -2.13
APOBP04114 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC1.77□□□□□ -2.13
APOBP04114 SEPT7P6-201ENST00000469999 1143 ntBASIC1.77□□□□□ -2.13
APOBP04114 ARL2BPP6-201ENST00000512757 439 ntBASIC1.77□□□□□ -2.13
APOBP04114 OR5G4P-201ENST00000525251 760 ntBASIC1.77□□□□□ -2.13
APOBP04114 RGS4-207ENST00000527809 817 ntTSL 4 BASIC1.77□□□□□ -2.13
APOBP04114 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC1.77□□□□□ -2.13
APOBP04114 AC009977.1-201ENST00000586015 570 ntBASIC1.77□□□□□ -2.13
APOBP04114 AC016727.1-205ENST00000605437 569 ntBASIC1.77□□□□□ -2.13
APOBP04114 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
APOBP04114 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC1.77□□□□□ -2.13
APOBP04114 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
APOBP04114 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC1.76□□□□□ -2.13
APOBP04114 RNU6-316P-201ENST00000391027 107 ntBASIC1.76□□□□□ -2.13
APOBP04114 MIR1287-201ENST00000408492 90 ntBASIC1.76□□□□□ -2.13
APOBP04114 MRPS18BP2-201ENST00000434310 759 ntBASIC1.76□□□□□ -2.13
APOBP04114 Z99127.3-201ENST00000448158 395 ntBASIC1.76□□□□□ -2.13
APOBP04114 AC011602.1-201ENST00000546484 331 ntBASIC1.76□□□□□ -2.13
APOBP04114 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.76□□□□□ -2.13
APOBP04114 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.76□□□□□ -2.13
APOBP04114 MTCO1P22-201ENST00000604619 1360 ntBASIC1.76□□□□□ -2.13
APOBP04114 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
APOBP04114 AC092079.1-201ENST00000558620 1985 ntBASIC1.76□□□□□ -2.13
APOBP04114 RNVU1-3-201ENST00000364313 161 ntBASIC1.76□□□□□ -2.13
APOBP04114 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
APOBP04114 AC010401.1-201ENST00000463867 348 ntBASIC1.76□□□□□ -2.13
APOBP04114 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC1.76□□□□□ -2.13
APOBP04114 AC117522.3-201ENST00000507974 584 ntBASIC1.76□□□□□ -2.13
APOBP04114 AC103710.3-201ENST00000608157 948 ntBASIC1.76□□□□□ -2.13
APOBP04114 TAB3P1-202ENST00000452645 1634 ntBASIC1.76□□□□□ -2.13
APOBP04114 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
APOBP04114 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
APOBP04114 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC1.76□□□□□ -2.13
APOBP04114 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
APOBP04114 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC1.76□□□□□ -2.13
APOBP04114 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.76□□□□□ -2.13
APOBP04114 AC108210.2-201ENST00000503681 201 ntBASIC1.76□□□□□ -2.13
APOBP04114 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.76□□□□□ -2.13
APOBP04114 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.76□□□□□ -2.13
APOBP04114 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
APOBP04114 AC114967.1-201ENST00000504890 259 ntBASIC1.76□□□□□ -2.13
APOBP04114 AC006445.2-201ENST00000510061 472 ntBASIC1.76□□□□□ -2.13
APOBP04114 RN7SKP283-201ENST00000517197 270 ntBASIC1.76□□□□□ -2.13
APOBP04114 OR1AB1P-201ENST00000585564 761 ntBASIC1.76□□□□□ -2.13
APOBP04114 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC1.76□□□□□ -2.13
APOBP04114 AC010620.2-201ENST00000600135 313 ntBASIC1.76□□□□□ -2.13
APOBP04114 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
APOBP04114 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
APOBP04114 AL592494.2-201ENST00000425455 1548 ntBASIC1.75□□□□□ -2.13
APOBP04114 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
APOBP04114 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
APOBP04114 DCAF13P3-201ENST00000561147 1334 ntBASIC1.75□□□□□ -2.13
APOBP04114 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
APOBP04114 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.75□□□□□ -2.13
APOBP04114 RN7SL330P-201ENST00000469709 307 ntBASIC1.75□□□□□ -2.13
APOBP04114 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.75□□□□□ -2.13
APOBP04114 AC026634.1-201ENST00000634369 198 ntBASIC1.75□□□□□ -2.13
APOBP04114 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
APOBP04114 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
APOBP04114 RN7SKP192-201ENST00000411291 327 ntBASIC1.75□□□□□ -2.13
APOBP04114 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
APOBP04114 HMGB1P16-201ENST00000447155 540 ntBASIC1.75□□□□□ -2.13
APOBP04114 KLHL2P1-201ENST00000508691 521 ntBASIC1.75□□□□□ -2.13
APOBP04114 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
APOBP04114 AC104027.1-201ENST00000521887 300 ntBASIC1.75□□□□□ -2.13
APOBP04114 UBTFL10-201ENST00000528532 562 ntBASIC1.75□□□□□ -2.13
APOBP04114 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
APOBP04114 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.75□□□□□ -2.13
APOBP04114 GMCL1P2-201ENST00000605230 823 ntBASIC1.75□□□□□ -2.13
APOBP04114 AL356321.1-201ENST00000621360 228 ntBASIC1.75□□□□□ -2.13
APOBP04114 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
APOBP04114 AL161431.1-201ENST00000618966 4205 ntBASIC1.75□□□□□ -2.13
APOBP04114 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
APOBP04114 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
APOBP04114 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms