Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
COL4A1P02462 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.39□□□□□ -1.87
COL4A1P02462 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
COL4A1P02462 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.38□□□□□ -1.87
COL4A1P02462 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL4A1P02462 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
COL4A1P02462 AC012020.1-201ENST00000624541 1728 ntBASIC3.38□□□□□ -1.87
COL4A1P02462 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
COL4A1P02462 U3.11-201ENST00000364476 212 ntBASIC3.38□□□□□ -1.87
COL4A1P02462 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.38□□□□□ -1.87
COL4A1P02462 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.38□□□□□ -1.87
COL4A1P02462 AC073508.1-201ENST00000428866 656 ntBASIC3.38□□□□□ -1.87
COL4A1P02462 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
COL4A1P02462 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.38□□□□□ -1.87
COL4A1P02462 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.38□□□□□ -1.87
COL4A1P02462 AC021755.1-201ENST00000559747 1447 ntBASIC3.38□□□□□ -1.87
COL4A1P02462 AC092593.1-201ENST00000515413 1815 ntBASIC3.38□□□□□ -1.87
COL4A1P02462 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.38□□□□□ -1.87
COL4A1P02462 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL4A1P02462 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
COL4A1P02462 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL4A1P02462 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
COL4A1P02462 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
COL4A1P02462 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL4A1P02462 RPL31P12-201ENST00000422587 358 ntBASIC3.37□□□□□ -1.87
COL4A1P02462 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.37□□□□□ -1.87
COL4A1P02462 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.37□□□□□ -1.87
COL4A1P02462 SNORA31.21-201ENST00000517180 77 ntBASIC3.37□□□□□ -1.87
COL4A1P02462 AC009097.3-201ENST00000563557 1018 ntBASIC3.37□□□□□ -1.87
COL4A1P02462 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.37□□□□□ -1.87
COL4A1P02462 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
COL4A1P02462 LINC01355-201ENST00000566551 5444 ntBASIC3.37□□□□□ -1.87
COL4A1P02462 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
COL4A1P02462 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.37□□□□□ -1.87
COL4A1P02462 RNU4-44P-201ENST00000363050 141 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
COL4A1P02462 AC105402.2-201ENST00000438503 358 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 AC113430.1-201ENST00000506872 718 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 RPL7L1P13-201ENST00000511702 739 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 RNA5SP320-201ENST00000516263 124 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 OR5AK3P-201ENST00000527486 1297 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 AC010149.2-201ENST00000637608 315 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 AC063923.1-201ENST00000478982 1619 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL4A1P02462 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
COL4A1P02462 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
COL4A1P02462 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.36□□□□□ -1.87
COL4A1P02462 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.36□□□□□ -1.87
COL4A1P02462 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.36□□□□□ -1.87
COL4A1P02462 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.36□□□□□ -1.87
COL4A1P02462 AC007563.3-201ENST00000433233 371 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 AL589765.3-201ENST00000446084 462 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.36□□□□□ -1.87
COL4A1P02462 CYCSP20-201ENST00000473154 315 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 AC093278.1-201ENST00000494700 600 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.36□□□□□ -1.87
COL4A1P02462 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.36□□□□□ -1.87
COL4A1P02462 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 MIR6817-201ENST00000615588 66 ntBASIC3.36□□□□□ -1.87
COL4A1P02462 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.35□□□□□ -1.87
COL4A1P02462 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL4A1P02462 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
COL4A1P02462 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
COL4A1P02462 MIR181A2-201ENST00000384863 110 ntBASIC3.35□□□□□ -1.87
COL4A1P02462 MTCO1P51-201ENST00000427672 1060 ntBASIC3.35□□□□□ -1.87
COL4A1P02462 HSPE1P6-201ENST00000479457 291 ntBASIC3.35□□□□□ -1.87
COL4A1P02462 GOLGA5P1-201ENST00000507317 980 ntBASIC3.35□□□□□ -1.87
COL4A1P02462 AC005351.1-201ENST00000511152 786 ntBASIC3.35□□□□□ -1.87
COL4A1P02462 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.35□□□□□ -1.87
COL4A1P02462 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.35□□□□□ -1.87
COL4A1P02462 SERPINE4P-201ENST00000554978 281 ntBASIC3.35□□□□□ -1.87
COL4A1P02462 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.35□□□□□ -1.87
COL4A1P02462 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.35□□□□□ -1.87
COL4A1P02462 MTND4P10-201ENST00000446199 1363 ntBASIC3.35□□□□□ -1.87
COL4A1P02462 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
COL4A1P02462 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.34□□□□□ -1.87
COL4A1P02462 RNA5SP68-201ENST00000363885 119 ntBASIC3.34□□□□□ -1.87
COL4A1P02462 MIR512-1-201ENST00000384913 84 ntBASIC3.34□□□□□ -1.87
COL4A1P02462 RNA5SP274-201ENST00000410484 108 ntBASIC3.34□□□□□ -1.87
COL4A1P02462 AC245291.1-201ENST00000419501 328 ntBASIC3.34□□□□□ -1.87
COL4A1P02462 YPEL5P1-201ENST00000419731 367 ntBASIC3.34□□□□□ -1.87
COL4A1P02462 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.34□□□□□ -1.87
COL4A1P02462 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.34□□□□□ -1.87
COL4A1P02462 RNA5SP148-201ENST00000516527 94 ntBASIC3.34□□□□□ -1.87
COL4A1P02462 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.34□□□□□ -1.87
COL4A1P02462 EIF4A2P3-201ENST00000525903 1055 ntBASIC3.34□□□□□ -1.87
COL4A1P02462 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.34□□□□□ -1.87
COL4A1P02462 AC005046.1-201ENST00000608515 625 ntBASIC3.34□□□□□ -1.87
COL4A1P02462 TUG1_1.1-201ENST00000610654 145 ntBASIC3.34□□□□□ -1.87
COL4A1P02462 AL590808.1-201ENST00000618696 141 ntBASIC3.34□□□□□ -1.87
COL4A1P02462 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.34□□□□□ -1.87
COL4A1P02462 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.34□□□□□ -1.87
COL4A1P02462 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.34□□□□□ -1.87
COL4A1P02462 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL4A1P02462 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL4A1P02462 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.34□□□□□ -1.87
COL4A1P02462 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
COL4A1P02462 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
COL4A1P02462 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms