Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 MIR8059-201ENST00000620427 81 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 AF127577.6-201ENST00000623352 2191 ntBASIC2.74□□□□□ -1.97
HLA-DQA1P01909 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
HLA-DQA1P01909 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AL133383.2-201ENST00000622958 2336 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 U3.11-201ENST00000364476 212 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 MIR141-201ENST00000384975 95 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 MTHFD2P2-201ENST00000407725 247 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 OR51A3P-201ENST00000413596 924 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC068533.1-201ENST00000418542 415 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC009237.2-201ENST00000421358 284 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 COX6CP17-201ENST00000421389 185 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AL691449.1-201ENST00000426570 421 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 RPP40P1-201ENST00000426762 456 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC044797.1-201ENST00000445744 679 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AL050341.1-201ENST00000447743 313 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 HMGN2P21-201ENST00000447764 270 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 PPIAP3-201ENST00000450588 505 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 RPS20P32-201ENST00000456044 356 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 RPS23P7-201ENST00000466210 444 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC091959.2-201ENST00000477363 321 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC110792.1-201ENST00000491826 472 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC091167.1-201ENST00000492017 396 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC026979.1-201ENST00000492525 396 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 RPS27AP13-201ENST00000498403 237 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 TMEM248P1-201ENST00000510579 951 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AP006245.1-201ENST00000522549 120 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 CENPUP2-201ENST00000555897 1186 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 TRAV15-201ENST00000556680 249 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 MTATP6P2-201ENST00000603319 678 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC016542.1-201ENST00000608259 493 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 MIR378J-201ENST00000611988 109 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 XIST_intron.1-201ENST00000619444 68 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 MIR6830-201ENST00000636015 70 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 ELL2P4-201ENST00000446870 1376 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AL592494.2-201ENST00000425455 1548 ntBASIC2.73□□□□□ -1.97
HLA-DQA1P01909 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
HLA-DQA1P01909 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 OR6K3-202ENST00000368146 996 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 OR1L1-202ENST00000373686 1083 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 RNU6-468P-201ENST00000384003 109 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 RNU6-356P-201ENST00000384140 107 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 SFR1P1-201ENST00000403720 688 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC092638.1-201ENST00000411966 1275 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 MTND4P22-201ENST00000413116 1169 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC234064.1-201ENST00000436312 247 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 SNORA71B-202ENST00000439232 272 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AC002542.1-201ENST00000440683 193 ntBASIC2.72□□□□□ -1.97
HLA-DQA1P01909 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.72□□□□□ -1.97
HLA-DQA1P01909 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms