Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 SNORD15B-201ENST00000384714 146 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 MIR7-1-201ENST00000384871 110 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 PTP4A1P5-201ENST00000420305 455 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 AL353678.1-201ENST00000422735 741 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 BTBD7P2-201ENST00000441962 620 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 RPL37P4-201ENST00000448908 268 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 RPL31P20-201ENST00000449593 360 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 TPRKBP1-201ENST00000456243 481 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 AC006445.1-201ENST00000491925 405 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CTDNEP1O95476 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 AC010680.4-201ENST00000605334 543 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 AL162574.2-201ENST00000614618 657 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 AC003001.2-201ENST00000616294 831 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 AC244100.1-202ENST00000621554 382 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 AC092628.2-201ENST00000622492 339 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 AC099506.2-201ENST00000623074 221 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 AC139713.2-210ENST00000641741 992 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTDNEP1O95476 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 AL035425.3-201ENST00000564206 4996 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTDNEP1O95476 AC025125.1-201ENST00000624743 1922 ntBASIC3.54□□□□□ -1.84
CTDNEP1O95476 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.54□□□□□ -1.84
CTDNEP1O95476 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTDNEP1O95476 AP003122.5-201ENST00000527668 3766 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTDNEP1O95476 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CTDNEP1O95476 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTDNEP1O95476 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CTDNEP1O95476 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTDNEP1O95476 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTDNEP1O95476 SNORD6-201ENST00000365444 73 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 MIR124-3-201ENST00000384866 87 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 AL512504.1-201ENST00000415494 778 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 RPL30P3-201ENST00000424262 333 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 MTCO1P57-201ENST00000432182 261 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 MRPS33P4-201ENST00000434892 317 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 Z99127.2-201ENST00000441426 334 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 BUD31P2-201ENST00000449374 300 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 BX510359.1-201ENST00000456973 237 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 RPL9P32-201ENST00000464118 620 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 OR52A4P-202ENST00000481634 799 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTDNEP1O95476 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CTDNEP1O95476 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC008885.1-201ENST00000514930 301 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC067904.2-201ENST00000517322 1283 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC022790.1-201ENST00000522872 204 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 MIR3186-201ENST00000577404 85 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 MTCO2P22-201ENST00000603246 681 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 KATNBL1P1-201ENST00000605192 748 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC018816.2-201ENST00000621460 353 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC119674.1-212ENST00000641155 993 ntBASIC3.53□□□□□ -1.84
CTDNEP1O95476 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.53□□□□□ -1.84
CTDNEP1O95476 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.53□□□□□ -1.85
CTDNEP1O95476 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTDNEP1O95476 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 AC096656.1-201ENST00000623826 1364 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTDNEP1O95476 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 RNA5SP72-201ENST00000364442 117 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CTDNEP1O95476 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 RNU6-532P-201ENST00000384318 107 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 PTMAP5-201ENST00000393073 333 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 RPL21P41-201ENST00000459863 264 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 AC117440.1-201ENST00000474107 571 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 AC118282.1-201ENST00000506408 765 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 AC119751.1-201ENST00000513357 765 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms