Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC011933.1-201ENST00000413334 321 ntBASIC4.24□□□□□ -1.73
LDB2O43679 TIMM9P2-201ENST00000419324 266 ntBASIC4.24□□□□□ -1.73
LDB2O43679 EIF4EP1-201ENST00000422311 642 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.24□□□□□ -1.73
LDB2O43679 AC010153.1-201ENST00000432862 727 ntBASIC4.24□□□□□ -1.73
LDB2O43679 RPL12P46-201ENST00000436610 195 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC092013.1-201ENST00000438795 332 ntBASIC4.24□□□□□ -1.73
LDB2O43679 HMGB3P9-201ENST00000441799 583 ntBASIC4.24□□□□□ -1.73
LDB2O43679 RAB11AP1-201ENST00000442978 646 ntBASIC4.24□□□□□ -1.73
LDB2O43679 MTND2P19-201ENST00000449129 1012 ntBASIC4.24□□□□□ -1.73
LDB2O43679 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.24□□□□□ -1.73
LDB2O43679 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.24□□□□□ -1.73
LDB2O43679 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.24□□□□□ -1.73
LDB2O43679 NF1P3-201ENST00000457709 450 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.24□□□□□ -1.73
LDB2O43679 AC116533.1-201ENST00000459748 321 ntBASIC4.24□□□□□ -1.73
LDB2O43679 RN7SL303P-201ENST00000469773 251 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC022795.1-201ENST00000473808 480 ntBASIC4.24□□□□□ -1.73
LDB2O43679 RPS6P4-201ENST00000494693 758 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC008958.1-201ENST00000511047 682 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC006499.6-201ENST00000511169 607 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.24□□□□□ -1.73
LDB2O43679 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.24□□□□□ -1.73
LDB2O43679 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.24□□□□□ -1.73
LDB2O43679 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.24□□□□□ -1.73
LDB2O43679 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDB2O43679 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.24□□□□□ -1.73
LDB2O43679 AC018552.3-201ENST00000567416 561 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC090312.1-201ENST00000580637 348 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC025165.5-201ENST00000602802 578 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AP001981.2-201ENST00000603241 418 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC233280.2-201ENST00000603917 1070 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AL355816.1-201ENST00000607951 118 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AL354760.1-201ENST00000608357 643 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC245297.2-201ENST00000610119 565 ntBASIC4.24□□□□□ -1.73
LDB2O43679 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDB2O43679 MIR6716-201ENST00000613413 80 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC114781.5-201ENST00000615297 108 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AC026634.1-201ENST00000634369 198 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.24□□□□□ -1.73
LDB2O43679 AL596275.2-204ENST00000641628 552 ntBASIC4.24□□□□□ -1.73
LDB2O43679 AL596275.2-206ENST00000641957 626 ntBASIC4.24□□□□□ -1.73
LDB2O43679 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
LDB2O43679 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDB2O43679 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
LDB2O43679 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.24□□□□□ -1.73
LDB2O43679 AL390862.1-201ENST00000635467 1469 ntBASIC4.24□□□□□ -1.73
LDB2O43679 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.23□□□□□ -1.73
LDB2O43679 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
LDB2O43679 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDB2O43679 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDB2O43679 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDB2O43679 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.23□□□□□ -1.73
LDB2O43679 AL390237.1-201ENST00000404226 1415 ntBASIC4.23□□□□□ -1.73
LDB2O43679 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.23□□□□□ -1.73
LDB2O43679 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
LDB2O43679 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.23□□□□□ -1.73
LDB2O43679 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDB2O43679 RNU6-115P-201ENST00000364310 107 ntBASIC4.23□□□□□ -1.73
LDB2O43679 RN7SKP227-201ENST00000364445 330 ntBASIC4.23□□□□□ -1.73
LDB2O43679 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDB2O43679 OR6C69P-201ENST00000394268 893 ntBASIC4.23□□□□□ -1.73
LDB2O43679 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDB2O43679 AL138880.1-201ENST00000405824 642 ntBASIC4.23□□□□□ -1.73
LDB2O43679 MIR1179-201ENST00000408703 91 ntBASIC4.23□□□□□ -1.73
LDB2O43679 RNU6-920P-201ENST00000410926 92 ntBASIC4.23□□□□□ -1.73
LDB2O43679 RNU6-603P-201ENST00000411403 107 ntBASIC4.23□□□□□ -1.73
LDB2O43679 RPS15AP38-201ENST00000413110 372 ntBASIC4.23□□□□□ -1.73
LDB2O43679 HSFY4P-201ENST00000415994 1181 ntBASIC4.23□□□□□ -1.73
LDB2O43679 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.23□□□□□ -1.73
LDB2O43679 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.23□□□□□ -1.73
LDB2O43679 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.23□□□□□ -1.73
LDB2O43679 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
LDB2O43679 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.23□□□□□ -1.73
LDB2O43679 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.23□□□□□ -1.73
LDB2O43679 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.23□□□□□ -1.73
LDB2O43679 AL360221.1-201ENST00000445989 335 ntBASIC4.23□□□□□ -1.73
LDB2O43679 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDB2O43679 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.23□□□□□ -1.73
LDB2O43679 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.23□□□□□ -1.73
LDB2O43679 AL672167.3-201ENST00000465951 960 ntBASIC4.23□□□□□ -1.73
LDB2O43679 AC041039.1-201ENST00000485656 536 ntBASIC4.23□□□□□ -1.73
LDB2O43679 RPL7P38-201ENST00000488396 739 ntBASIC4.23□□□□□ -1.73
LDB2O43679 AC104685.1-201ENST00000502445 371 ntBASIC4.23□□□□□ -1.73
LDB2O43679 DSTNP2-201ENST00000504533 515 ntBASIC4.23□□□□□ -1.73
LDB2O43679 SNORA31.9-201ENST00000516429 84 ntBASIC4.23□□□□□ -1.73
LDB2O43679 RNU6-1261P-201ENST00000517194 104 ntBASIC4.23□□□□□ -1.73
LDB2O43679 NPM1P6-201ENST00000521088 871 ntBASIC4.23□□□□□ -1.73
LDB2O43679 OR5AK1P-201ENST00000524837 922 ntBASIC4.23□□□□□ -1.73
LDB2O43679 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.23□□□□□ -1.73
LDB2O43679 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDB2O43679 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.23□□□□□ -1.73
LDB2O43679 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDB2O43679 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
LDB2O43679 PSMB7P1-201ENST00000556349 514 ntBASIC4.23□□□□□ -1.73
LDB2O43679 TRAV15-201ENST00000556680 249 ntBASIC4.23□□□□□ -1.73
LDB2O43679 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.23□□□□□ -1.73
LDB2O43679 AC103987.3-201ENST00000582071 292 ntBASIC4.23□□□□□ -1.73
LDB2O43679 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.23□□□□□ -1.73
LDB2O43679 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms