Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF3O43395 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.09□□□□□ -1.59
PRPF3O43395 AC136618.2-201ENST00000575091 400 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.09□□□□□ -1.59
PRPF3O43395 OR4G1P-201ENST00000588632 938 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 AC068790.4-201ENST00000602474 263 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 LLPHP1-201ENST00000603571 367 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 AC105129.3-201ENST00000605455 485 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 AC124312.4-201ENST00000605533 310 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 RNA5SP108-201ENST00000605921 117 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 Z98200.1-201ENST00000607298 470 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 AC091979.2-201ENST00000607514 214 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF3O43395 AL357080.1-201ENST00000617394 239 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 AP003399.1-201ENST00000637534 361 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF3O43395 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 A2MP1-204ENST00000566278 4130 ntBASIC5.09□□□□□ -1.59
PRPF3O43395 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF3O43395 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 AC097714.1-201ENST00000511272 1647 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
PRPF3O43395 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF3O43395 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF3O43395 KPNA2P2-201ENST00000419546 1489 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
PRPF3O43395 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF3O43395 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF3O43395 RPL21P132-201ENST00000331267 462 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 RNA5SP447-201ENST00000363749 119 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 RNVU1-3-201ENST00000364313 161 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 RNA5SP88-201ENST00000365560 109 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 SKINT1L-201ENST00000401057 817 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 AL031577.2-201ENST00000404133 280 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 SNORA11F-201ENST00000408237 128 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 AC009237.10-201ENST00000414112 510 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 FNDC3CP-201ENST00000420795 1155 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 AC092017.2-201ENST00000427600 362 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 AC068287.1-201ENST00000430283 295 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 ZYG11AP1-201ENST00000430329 837 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF3O43395 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.08□□□□□ -1.6
PRPF3O43395 AL445567.1-201ENST00000439121 144 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.08□□□□□ -1.6
PRPF3O43395 AC009963.2-201ENST00000453431 138 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 SUMO2P2-201ENST00000456482 255 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 RN7SL41P-201ENST00000476144 297 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF3O43395 RN7SL459P-201ENST00000481078 302 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.08□□□□□ -1.6
PRPF3O43395 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF3O43395 AC008802.1-201ENST00000519121 791 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 IGLVVI-25-1-201ENST00000521893 249 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC5.08□□□□□ -1.6
PRPF3O43395 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.08□□□□□ -1.6
PRPF3O43395 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF3O43395 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF3O43395 AC135628.1-201ENST00000568867 534 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 MIR5096-201ENST00000583713 70 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 PIGPP4-201ENST00000584447 307 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 AC090948.1-201ENST00000607464 549 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF3O43395 AC025588.4-201ENST00000615802 908 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 AC099669.2-201ENST00000616549 437 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.08□□□□□ -1.6
PRPF3O43395 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.08□□□□□ -1.6
PRPF3O43395 PCMTD1P7-201ENST00000634506 357 ntBASIC5.08□□□□□ -1.6
PRPF3O43395 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.08□□□□□ -1.6
PRPF3O43395 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PRPF3O43395 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF3O43395 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF3O43395 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF3O43395 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
PRPF3O43395 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF3O43395 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PRPF3O43395 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF3O43395 AC139713.2-214ENST00000642059 1811 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 AC006971.1-201ENST00000407916 4486 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF3O43395 MIR331-201ENST00000362302 94 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF3O43395 RNU6-730P-201ENST00000383954 104 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF3O43395 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.07□□□□□ -1.6
PRPF3O43395 MTCO2P5-201ENST00000422621 426 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 AC019178.2-201ENST00000423595 505 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 AC093698.1-201ENST00000423843 571 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 AL732292.1-201ENST00000426692 226 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF3O43395 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.07□□□□□ -1.6
PRPF3O43395 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.07□□□□□ -1.6
PRPF3O43395 AC073587.1-201ENST00000447093 876 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PRPF3O43395 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.07□□□□□ -1.6
PRPF3O43395 PABPC1P3-201ENST00000469174 459 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 AC022034.3-201ENST00000471393 478 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 AC072039.1-201ENST00000477611 581 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 RN7SL812P-201ENST00000493791 279 ntBASIC5.07□□□□□ -1.6
PRPF3O43395 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.07□□□□□ -1.6
PRPF3O43395 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms