Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM38O00635 SGO1P2-201ENST00000429458 1589 ntBASIC4.72□□□□□ -1.65
TRIM38O00635 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM38O00635 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRIM38O00635 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM38O00635 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM38O00635 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM38O00635 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.65
TRIM38O00635 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
TRIM38O00635 Z73965.1-201ENST00000623412 2297 ntBASIC4.71□□□□□ -1.65
TRIM38O00635 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM38O00635 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM38O00635 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM38O00635 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM38O00635 SNRPEP3-201ENST00000338402 276 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 RNU6-657P-201ENST00000383904 107 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 RNY3P14-201ENST00000384309 102 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 RNA5SP345-201ENST00000410646 108 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 TPT1P2-201ENST00000413105 503 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM38O00635 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.71□□□□□ -1.66
TRIM38O00635 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM38O00635 RPS25P9-201ENST00000435591 252 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM38O00635 MTCO3P11-201ENST00000455103 774 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AC005008.1-201ENST00000456151 612 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 RNU7-125P-201ENST00000458760 62 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM38O00635 NCOR1P1-202ENST00000486162 291 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM38O00635 RPS4XP18-201ENST00000495480 763 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 HNRNPKP5-201ENST00000515300 253 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 RNU6-720P-201ENST00000516363 108 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 RN7SKP277-201ENST00000516895 283 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 UBE2NP1-201ENST00000545592 458 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 CCNG2P1-201ENST00000549521 1000 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AC008127.2-201ENST00000549925 1075 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.71□□□□□ -1.66
TRIM38O00635 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM38O00635 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM38O00635 AL049839.1-201ENST00000556151 657 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 RPL21P7-201ENST00000557463 483 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AC087477.6-201ENST00000559595 843 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AP005205.1-201ENST00000563503 508 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM38O00635 AC136624.4-201ENST00000573044 370 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.71□□□□□ -1.66
TRIM38O00635 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM38O00635 AC103881.1-201ENST00000603476 538 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 LARP7P1-201ENST00000605576 316 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM38O00635 TUG1_1.1-201ENST00000610654 145 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AC092650.2-201ENST00000619984 902 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AC140113.4-201ENST00000622087 222 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 AC005086.4-201ENST00000623065 213 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 MIR4496-201ENST00000635896 61 ntBASIC4.71□□□□□ -1.66
TRIM38O00635 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM38O00635 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM38O00635 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRIM38O00635 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.71□□□□□ -1.66
TRIM38O00635 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM38O00635 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM38O00635 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
TRIM38O00635 AL672167.1-203ENST00000641299 2975 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM38O00635 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
TRIM38O00635 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM38O00635 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM38O00635 Y_RNA.3-201ENST00000362331 103 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 SNORD113.2-201ENST00000364166 89 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 RNU6-1215P-201ENST00000384441 102 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 MIR195-201ENST00000385194 87 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 MIR1284-201ENST00000408337 120 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AL663109.1-201ENST00000411498 844 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AC073264.1-201ENST00000411508 416 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM38O00635 CHIAP3-201ENST00000423668 1133 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM38O00635 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM38O00635 AL354941.1-201ENST00000438600 464 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 TDGF1P1-201ENST00000445734 527 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AL671855.1-201ENST00000446875 1203 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AC009961.3-201ENST00000449832 765 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 RPL26P28-201ENST00000451325 435 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC009963.2-201ENST00000453431 138 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.7□□□□□ -1.66
TRIM38O00635 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 RNA5SP360-201ENST00000516555 118 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 RN7SKP234-201ENST00000517173 224 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM38O00635 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms