Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL592148.3-201ENST00000608771 2646 ntBASIC4.79□□□□□ -1.64
FOXN3O00409 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
FOXN3O00409 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXN3O00409 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
FOXN3O00409 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN3O00409 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.79□□□□□ -1.64
FOXN3O00409 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
FOXN3O00409 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXN3O00409 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
FOXN3O00409 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXN3O00409 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXN3O00409 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
FOXN3O00409 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
FOXN3O00409 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC007066.1-201ENST00000392902 381 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 HDGFP1-201ENST00000405943 252 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 RPL23AP48-201ENST00000406913 488 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 RNA5SP239-201ENST00000410218 129 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC083875.1-201ENST00000419509 405 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC092647.1-201ENST00000420654 287 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 RPEP2-201ENST00000432149 701 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 MTND1P34-201ENST00000438556 671 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 ISCA1P2-201ENST00000438679 421 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC073587.1-201ENST00000447093 876 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 MTND1P29-201ENST00000448112 647 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXN3O00409 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN3O00409 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN3O00409 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN3O00409 DSTNP2-201ENST00000504533 515 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.78□□□□□ -1.64
FOXN3O00409 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC006499.2-201ENST00000513470 337 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXN3O00409 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXN3O00409 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXN3O00409 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN3O00409 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 MIR5186-201ENST00000577504 120 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC008759.1-201ENST00000589783 983 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC119751.7-201ENST00000600494 245 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 MTCYBP22-201ENST00000603788 447 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 AC115621.1-201ENST00000604653 858 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 RNU6-88P-201ENST00000606801 100 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 AC020634.1-201ENST00000608701 549 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN3O00409 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
FOXN3O00409 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN3O00409 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN3O00409 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXN3O00409 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
FOXN3O00409 AC099063.3-201ENST00000642066 185 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXN3O00409 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.78□□□□□ -1.64
FOXN3O00409 MTND4P16-201ENST00000466108 1367 ntBASIC4.78□□□□□ -1.64
FOXN3O00409 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
FOXN3O00409 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXN3O00409 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXN3O00409 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXN3O00409 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXN3O00409 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
FOXN3O00409 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FOXN3O00409 RNA5SP307-201ENST00000362863 116 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 RN7SKP103-201ENST00000363848 320 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 RNU1-130P-201ENST00000363930 160 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXN3O00409 RNU6-723P-201ENST00000383973 107 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 MT-TH-201ENST00000387441 69 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FOXN3O00409 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 AL592293.2-201ENST00000422292 996 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 RPL7AP25-201ENST00000423357 805 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXN3O00409 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXN3O00409 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXN3O00409 AC006466.1-201ENST00000438721 289 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 UBE2V1P3-201ENST00000439651 417 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 USP9YP10-201ENST00000454868 628 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 RNU7-136P-201ENST00000458819 69 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 RPS27AP17-201ENST00000463344 455 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 RN7SL354P-201ENST00000469282 294 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 AC017015.1-201ENST00000477387 286 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 RPS4XP15-201ENST00000489210 795 ntBASIC4.77□□□□□ -1.65
FOXN3O00409 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXN3O00409 MTND4P2-201ENST00000507767 1203 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms