Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AL022067.1-201ENST00000602426 454 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 SRGNP1-201ENST00000603392 451 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC069304.3-201ENST00000603938 1084 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC069431.2-201ENST00000604149 1099 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC092354.2-201ENST00000607786 514 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC013437.2-201ENST00000639587 677 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 AC090337.1-201ENST00000579651 2074 ntBASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.78□□□□□ -1.8
NEDD8-MDP1E9PL57 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC007823.1-201ENST00000569932 1566 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 RNU5E-10P-201ENST00000363506 118 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 HLFP1-201ENST00000402375 499 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC245052.5-201ENST00000416320 649 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AL031736.2-201ENST00000426573 787 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 HIGD1AP12-201ENST00000427832 281 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC011242.1-201ENST00000433596 1158 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC073063.1-201ENST00000434352 607 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC073387.1-201ENST00000453261 709 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC098824.1-201ENST00000453565 980 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 SNORD105B-201ENST00000458770 79 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 RN7SL293P-201ENST00000481765 281 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC068305.1-201ENST00000497406 726 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 PRELID3BP6-201ENST00000503839 571 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC091860.1-201ENST00000505723 432 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 SNORA19.3-201ENST00000516165 130 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 SUMO2P20-201ENST00000520803 283 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC010376.1-201ENST00000522101 334 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 OR4A2P-201ENST00000527276 913 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 OR5B10P-201ENST00000532869 642 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC087897.1-201ENST00000550134 156 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC004217.3-201ENST00000551552 878 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AL442163.2-201ENST00000553912 710 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 ZNF971P-201ENST00000562068 1249 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 CYP2C60P-201ENST00000566088 139 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 NF1P5-201ENST00000588287 448 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 VN1R7P-201ENST00000619242 903 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 AP001486.2-201ENST00000561652 5113 ntBASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
NEDD8-MDP1E9PL57 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 SNORD9-201ENST00000362566 104 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 RNA5SP322-201ENST00000363617 119 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 Y_RNA.333-201ENST00000365274 102 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 MIR183-201ENST00000384958 110 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 SNORA11.1-201ENST00000408133 129 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 VN1R51P-201ENST00000411675 945 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 MTND2P9-201ENST00000422293 931 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 RPS26P40-201ENST00000435209 294 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 RPL21P23-201ENST00000446654 460 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC010655.1-201ENST00000449336 292 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 HMGB3P21-201ENST00000452483 547 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC244505.3-201ENST00000454598 187 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AP000926.1-201ENST00000479573 241 ntBASIC3.76□□□□□ -1.81
NEDD8-MDP1E9PL57 AC011037.1-201ENST00000483964 558 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms