Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC010153.1-201ENST00000432862 727 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC006466.1-201ENST00000438721 289 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC092427.1-201ENST00000439177 601 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 RPL23AP16-201ENST00000441715 421 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 PTMAP3-201ENST00000447474 330 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AP000942.1-201ENST00000463969 747 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 OR4G11P-201ENST00000492842 939 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC017037.1-201ENST00000508460 471 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 MTCYBP37-201ENST00000510642 1133 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC008802.1-201ENST00000519121 791 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC239860.2-201ENST00000525886 270 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 CYCSP2-201ENST00000558168 301 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC136618.2-201ENST00000575091 400 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC064872.1-201ENST00000604823 1072 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 HSPE1P14-201ENST00000605812 302 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC106028.5-201ENST00000610332 395 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AC078899.5-201ENST00000612475 178 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AL158063.1-201ENST00000615349 536 ntBASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.3□□□□□ -1.72
TCRBV7S3A2A0A539 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 OR4G11P-202ENST00000642116 1414 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RNU6-623P-201ENST00000363143 105 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RNU1-85P-201ENST00000364127 164 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 SNORD116-4-201ENST00000384733 96 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 SNORA26.8-201ENST00000391306 124 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RN7SKP235-201ENST00000410662 305 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RNA5SP306-201ENST00000411087 107 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 SAGE2P-201ENST00000420011 2126 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 EIF1P3-201ENST00000423841 334 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AL158073.1-201ENST00000426848 1104 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 UBE2FP3-201ENST00000436366 524 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RPL12P46-201ENST00000436610 195 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 MTND4P6-201ENST00000438297 472 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC105402.2-201ENST00000438503 358 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AL360221.1-201ENST00000445989 335 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 PHBP16-201ENST00000446318 950 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RPL39P6-201ENST00000448289 150 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 OR6C5P-201ENST00000452388 923 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RPL23AP81-201ENST00000455252 467 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 APOOP2-201ENST00000461561 539 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RN7SL98P-201ENST00000462271 300 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC087879.1-201ENST00000474343 374 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AL024509.2-201ENST00000493462 493 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RN7SL691P-201ENST00000494487 301 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RNA5SP519-201ENST00000516480 119 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC007115.1-201ENST00000546853 234 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 MTCYBP28-201ENST00000566728 1132 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC012435.1-202ENST00000568772 240 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 KPNA2P3-201ENST00000584190 848 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms