Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 RPS7P15-201ENST00000415804 584 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC245052.5-201ENST00000416320 649 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC006960.1-201ENST00000419980 153 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 GAPDHP27-201ENST00000447427 1020 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC146507.1-201ENST00000468335 354 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 IGKV2-26-201ENST00000518305 343 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 MIR5186-201ENST00000577504 120 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 MIR4474-201ENST00000579189 78 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC015917.1-201ENST00000579654 510 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 MIR3690-201ENST00000580266 75 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 MIR3158-1-201ENST00000583596 81 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC091488.1-201ENST00000604239 660 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC245389.1-201ENST00000605141 529 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC019176.2-201ENST00000611579 315 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AL355365.1-201ENST00000616480 294 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC006133.1-201ENST00000617106 264 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AL356321.1-201ENST00000621360 228 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC127502.3-201ENST00000636170 1206 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 AC117529.2-201ENST00000512159 2068 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 MTND4P34-201ENST00000572715 1371 ntBASIC2.49□□□□□ -2.01
HLA-DRB4X5D2U9 HSPA8P19-201ENST00000505359 1517 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 RNU6-600P-201ENST00000362524 99 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 U3.6-201ENST00000363622 211 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 RNU6-532P-201ENST00000384318 107 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 MIR449B-201ENST00000384995 97 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC008065.1-201ENST00000428525 348 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC006994.1-201ENST00000438212 839 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 OR7L1P-201ENST00000456181 380 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 SNORA84-201ENST00000459229 133 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 RPL21P18-201ENST00000469899 480 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 NCOR1P1-202ENST00000486162 291 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 ATG10-AS1-201ENST00000504846 648 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC111000.5-201ENST00000506559 1178 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 RNA5SP217-201ENST00000515959 91 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 RN7SKP244-201ENST00000516513 307 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 SNORA67.7-201ENST00000516664 135 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 RN7SKP116-201ENST00000516902 319 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 MIR3922-201ENST00000585192 84 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC004832.5-201ENST00000608677 401 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC019080.5-201ENST00000624891 757 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC092159.4-201ENST00000624944 550 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AC093831.2-201ENST00000624393 3427 ntBASIC2.48□□□□□ -2.01
HLA-DRB4X5D2U9 AL353743.4-201ENST00000422653 1547 ntBASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 AL353743.1-202ENST00000431724 1695 ntBASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 AL031121.1-201ENST00000406553 254 ntBASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 RPL32P35-201ENST00000415214 394 ntBASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 AC069157.1-201ENST00000421749 137 ntBASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 AL031736.2-201ENST00000426573 787 ntBASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 RPL21P112-201ENST00000434403 463 ntBASIC2.47□□□□□ -2.01
HLA-DRB4X5D2U9 AC005019.1-201ENST00000436455 431 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms