Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC006390.1-201ENST00000508068 283 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 RNU1-6P-201ENST00000516290 144 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC008694.2-201ENST00000517591 306 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AP004247.1-201ENST00000531556 1289 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AP006289.1-201ENST00000538089 277 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC087477.6-201ENST00000559595 843 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC093249.4-201ENST00000564755 259 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 MIR5699-201ENST00000578903 90 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC090616.5-202ENST00000582111 297 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AL031985.2-201ENST00000600955 480 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC007390.2-201ENST00000606229 3803 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 MIR7703-201ENST00000620784 77 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC091925.2-201ENST00000625059 256 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC092192.1-201ENST00000633154 1018 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 CRYM-AS1-204ENST00000637983 556 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 AC010928.1-201ENST00000592477 1447 ntBASIC5.31□□□□□ -1.56
COL4A3BPQ9Y5P4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 OR11H5P-202ENST00000641612 1325 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 SALL4P2-201ENST00000423288 2910 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AC079741.1-201ENST00000321498 212 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RNA5SP443-201ENST00000363083 132 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RNU6-263P-201ENST00000363811 107 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 SNORD116-1-201ENST00000384335 95 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RPS3AP26-201ENST00000398259 784 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RPS24P12-201ENST00000402084 394 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RPS16P5-201ENST00000406501 404 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 TPMTP3-201ENST00000411928 735 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RPS27AP7-201ENST00000422792 455 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 MRPS18BP2-201ENST00000434310 759 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AC129850.1-201ENST00000436203 508 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AC118469.1-201ENST00000442943 488 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AC011753.3-201ENST00000443436 406 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RPL36AP33-201ENST00000450395 310 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AC091564.1-201ENST00000464563 479 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RPS4XP10-201ENST00000465034 731 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RPL30P9-201ENST00000465586 330 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RN7SL738P-201ENST00000470264 297 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AC023424.2-201ENST00000493479 777 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 COX7A2P2-201ENST00000505291 250 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 AC011260.1-201ENST00000578420 472 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RN7SL52P-201ENST00000584271 284 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 COX6CP4-201ENST00000605798 228 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RN7SL722P-201ENST00000617780 284 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RN7SL565P-201ENST00000618246 284 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 ZNF833P-201ENST00000424938 1494 ntBASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.3□□□□□ -1.56
COL4A3BPQ9Y5P4 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 MTND4P16-201ENST00000466108 1367 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 MFSD8-216ENST00000641147 4009 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AL590240.1-201ENST00000334118 313 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AL672167.1-206ENST00000356293 943 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 RNU6-777P-201ENST00000364265 104 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 RNA5SP505-201ENST00000364748 108 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 SNORD116-9-201ENST00000384000 95 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 RNU6-398P-201ENST00000384143 109 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 SNORD116-3-201ENST00000384287 95 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 SNORD116-7-201ENST00000384404 95 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 SNORD116-5-201ENST00000384462 95 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms