Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNU6-272P-201ENST00000411028 104 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 CRYBB2P1-203ENST00000415709 538 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 NUP35P2-201ENST00000416748 943 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC068533.1-201ENST00000418542 415 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 RPL7P53-201ENST00000421245 739 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC241520.1-201ENST00000422654 1099 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC006946.1-201ENST00000429106 328 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 NDUFB1P1-201ENST00000435191 180 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AP000949.1-201ENST00000438328 629 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AL356535.1-201ENST00000440335 398 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 RPS26P30-201ENST00000443431 335 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC015724.1-201ENST00000478577 156 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 RN7SL293P-201ENST00000481765 281 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 MTND1P36-201ENST00000522384 936 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 OR5B10P-201ENST00000532869 642 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 TRAV15-201ENST00000556680 249 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC023824.3-201ENST00000569003 562 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AP001180.3-201ENST00000582221 145 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AP002906.1-201ENST00000603405 233 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AP003117.2-201ENST00000606010 545 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 MIR486-1-201ENST00000612171 68 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC078880.5-201ENST00000617845 421 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC006249.1-201ENST00000621223 471 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AP000943.4-201ENST00000622912 357 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC068880.4-201ENST00000623082 495 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AL732618.1-201ENST00000623251 301 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC106730.3-201ENST00000624568 641 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AL109659.3-201ENST00000624985 950 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 U6.105-201ENST00000637379 88 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AC244258.1-201ENST00000637553 1071 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AL392088.2-201ENST00000637607 285 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AL365440.1-201ENST00000436135 2167 ntBASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLCF1Q9UBD9 AL136964.1-201ENST00000622038 2990 ntBASIC3.21□□□□□ -1.89
CLCF1Q9UBD9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CLCF1Q9UBD9 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CLCF1Q9UBD9 AC090337.1-201ENST00000579651 2074 ntBASIC3.21□□□□□ -1.89
CLCF1Q9UBD9 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 ZNF33CP-201ENST00000432492 2030 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 MIR423-201ENST00000362201 94 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 MIR208A-201ENST00000362287 71 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 SNORA70.4-201ENST00000365509 134 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 RNU6-1293P-201ENST00000384077 107 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 MTHFD2P2-201ENST00000407725 247 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 RNU6-77P-201ENST00000410554 91 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 ELOCP6-201ENST00000429066 328 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC073063.1-201ENST00000434352 607 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AF228730.2-201ENST00000438784 848 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL929288.2-201ENST00000446368 407 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL096829.2-201ENST00000446582 742 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 GXYLT1P1-201ENST00000446657 490 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC005002.1-201ENST00000447458 540 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 RPL23AP15-201ENST00000450202 459 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 ELOCP12-201ENST00000458706 328 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 snoU13.22-201ENST00000459428 104 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 RPS17P11-201ENST00000474297 293 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC016550.1-201ENST00000505348 785 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC010342.1-201ENST00000514047 877 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 PRELID3BP4-201ENST00000515476 571 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 SNORA70.18-201ENST00000516696 98 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC103843.2-201ENST00000530523 682 ntBASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCF1Q9UBD9 AC092747.2-201ENST00000545069 983 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms