Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
PDLIM7Q9NR12 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM7Q9NR12 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM7Q9NR12 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PDLIM7Q9NR12 DHX40P1-201ENST00000588725 1412 ntBASIC5.57□□□□□ -1.52
PDLIM7Q9NR12 AC099654.2-201ENST00000433031 1980 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 PHKBP1-201ENST00000450951 1951 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 SNORA51.12-201ENST00000384448 134 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 Y_RNA.535-201ENST00000384612 99 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 MIR23A-201ENST00000385245 73 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 BX510359.2-201ENST00000417920 305 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 RPL21P111-201ENST00000418453 477 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 RPL37P3-201ENST00000456825 293 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 RPL23AP71-201ENST00000470966 469 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC012170.1-201ENST00000495139 359 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 HMGN1P12-201ENST00000499125 195 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC105914.1-201ENST00000511798 226 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 SAP18P1-201ENST00000512058 390 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 RNA5SP392-201ENST00000516905 112 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 HIGD1AP6-201ENST00000521833 279 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC100784.1-201ENST00000522790 310 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC013828.2-201ENST00000532487 235 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC112187.2-201ENST00000604345 283 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AL355816.1-201ENST00000607951 118 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC026634.1-201ENST00000634369 198 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 MAPK10-263ENST00000641052 4307 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 ASNSP1-204ENST00000641977 1664 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 AC092162.3-201ENST00000624511 1624 ntBASIC5.56□□□□□ -1.52
PDLIM7Q9NR12 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AC139713.2-214ENST00000642059 1811 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AC021242.1-201ENST00000507315 2035 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 RNU6-533P-201ENST00000384144 107 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 MT-TD-201ENST00000387419 68 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 VN1R8P-201ENST00000407739 893 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 USP9YP27-201ENST00000418455 438 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AC009965.2-201ENST00000425328 970 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 BX890604.2-201ENST00000427883 474 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AC005154.2-201ENST00000438110 379 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 RABEPKP1-201ENST00000440529 1026 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AC004980.3-201ENST00000447046 365 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 AURKAPS2-201ENST00000454983 333 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 BX322784.1-201ENST00000455793 1077 ntBASIC5.55□□□□□ -1.52
PDLIM7Q9NR12 PPIAP21-201ENST00000464473 501 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms