Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC093331.1-201ENST00000521474 169 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 EIF5A2P1-201ENST00000564027 460 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 MIR3186-201ENST00000577404 85 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 SNORA62.6-201ENST00000606322 83 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 MIR1264-201ENST00000616374 69 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC018816.2-201ENST00000621460 353 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC092628.2-201ENST00000622492 339 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AP003400.6-201ENST00000624698 740 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 AC068724.3-201ENST00000625906 87 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 MTND5P11-201ENST00000511037 1812 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 ZNF542P-204ENST00000482727 1305 ntBASIC3.34□□□□□ -1.87
CCNB1IP1Q9NPC3 SEC63P2-201ENST00000503863 1939 ntBASIC3.34□□□□□ -1.88
CCNB1IP1Q9NPC3 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCNB1IP1Q9NPC3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.34□□□□□ -1.88
CCNB1IP1Q9NPC3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCNB1IP1Q9NPC3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.34□□□□□ -1.88
CCNB1IP1Q9NPC3 AC068647.1-201ENST00000489539 2265 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC007256.1-201ENST00000392253 2765 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 RNU6-1339P-201ENST00000363574 91 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AL138880.1-201ENST00000405824 642 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 MIR1250-201ENST00000408098 113 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 RNA5SP107-201ENST00000411358 122 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 MTND4P22-201ENST00000413116 1169 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC093578.1-201ENST00000415219 368 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC245291.1-201ENST00000419501 328 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 GLRXP1-201ENST00000423261 334 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AL390879.2-203ENST00000426943 1121 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 Z74696.2-201ENST00000436514 498 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 RPS26P56-201ENST00000444468 240 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC125238.1-201ENST00000448842 249 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 SLC31A1P1-201ENST00000451221 567 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC103987.1-201ENST00000473394 348 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC093267.1-201ENST00000489176 961 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 PHBP14-201ENST00000512887 367 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 RNU6-579P-201ENST00000516879 102 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AP006245.1-201ENST00000522549 120 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AF279873.1-201ENST00000523393 313 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC006518.1-201ENST00000541449 943 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 TRAV15-201ENST00000556680 249 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 MIR4504-201ENST00000577413 92 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC067959.1-201ENST00000604334 379 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC022149.2-201ENST00000621061 203 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC079684.1-201ENST00000621405 437 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AL354798.1-201ENST00000622505 329 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AL356118.1-201ENST00000635272 1078 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 AC116096.1-201ENST00000566804 2314 ntBASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCNB1IP1Q9NPC3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 RNA5SP383-201ENST00000362934 120 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 UBE2V1P11-201ENST00000411559 285 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 CRYBB2P1-203ENST00000415709 538 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC017079.2-201ENST00000416102 485 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC068533.1-201ENST00000418542 415 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AL139247.1-201ENST00000422768 325 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AL513174.1-201ENST00000423182 629 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 RPL36P19-201ENST00000430744 301 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 RPL23AP22-201ENST00000437556 453 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 RPS29P7-201ENST00000439662 171 ntBASIC3.32□□□□□ -1.88
CCNB1IP1Q9NPC3 AL513321.1-201ENST00000441175 761 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms