Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 MIR372-201ENST00000362225 67 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 Y_RNA.6-201ENST00000362350 114 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 DEFB108C-201ENST00000400154 252 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL031577.2-201ENST00000404133 280 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL136131.1-201ENST00000406079 803 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 RNU6-628P-201ENST00000410675 107 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL663109.1-201ENST00000411498 844 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 Z74696.2-201ENST00000436514 498 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC114495.1-201ENST00000441274 436 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 ARL5AP2-201ENST00000444698 533 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 HSFY6P-201ENST00000445573 403 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL671855.1-201ENST00000446875 1203 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 EEF1A1P1-201ENST00000447052 739 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL359073.1-201ENST00000448036 403 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 SETP11-201ENST00000473027 690 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC037198.2-201ENST00000478845 733 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC012158.1-204ENST00000483430 465 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL024509.2-201ENST00000493462 493 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 RN7SL812P-201ENST00000493791 279 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 RPS6P4-201ENST00000494693 758 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 HSPE1P23-201ENST00000509838 286 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC104108.1-201ENST00000509930 412 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC079140.3-201ENST00000511111 550 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC091965.2-201ENST00000512324 613 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AP002963.1-201ENST00000530590 184 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AADACP1-206ENST00000561502 1193 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC107982.3-201ENST00000584957 985 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 MIR4999-201ENST00000585029 91 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL354984.3-201ENST00000604803 325 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC006270.3-201ENST00000605967 1036 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL031775.1-201ENST00000607014 887 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 U6atac.1-201ENST00000616025 117 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC000367.1-201ENST00000452711 1766 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 DDX18P3-201ENST00000404856 2007 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AC138393.1-206ENST00000540997 1886 ntBASIC4.49□□□□□ -1.69
EBF3Q9H4W6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
EBF3Q9H4W6 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC093535.2-201ENST00000624769 2326 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 NACA3P-201ENST00000359690 648 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 Y_RNA.192-201ENST00000363977 102 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 RNU1-63P-201ENST00000383902 164 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 MT-TH-201ENST00000387441 69 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 SNORA48.7-201ENST00000391302 135 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AL034374.1-201ENST00000406329 351 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 RNU6-757P-201ENST00000410334 100 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 RPL6P29-201ENST00000414863 865 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 COX6CP15-201ENST00000426313 211 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 OR5AW1P-201ENST00000426334 1006 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AL354941.1-201ENST00000438600 464 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC027673.1-201ENST00000456245 405 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 RPL30P6-201ENST00000475925 342 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC108022.1-201ENST00000493466 478 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC084024.2-201ENST00000503480 791 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC104090.1-201ENST00000506341 1171 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 CBX3P3-201ENST00000508108 532 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 RNA5SP446-201ENST00000515955 82 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC008694.2-201ENST00000517591 306 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC018442.3-201ENST00000523025 183 ntBASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.48□□□□□ -1.69
EBF3Q9H4W6 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms