Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RNU6-492P-201ENST00000363035 104 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS11Q9H270 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
VPS11Q9H270 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS11Q9H270 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
VPS11Q9H270 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS11Q9H270 VN1R36P-201ENST00000414936 291 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AL512649.1-201ENST00000428997 581 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC093019.1-201ENST00000443135 252 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 RPS4XP4-201ENST00000443195 763 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC144530.1-201ENST00000452862 555 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS11Q9H270 RPL30P9-201ENST00000465586 330 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 AC010307.1-201ENST00000467206 836 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC019235.1-201ENST00000503847 207 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 AC021678.1-201ENST00000505195 936 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC109445.1-201ENST00000512356 383 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 RNU6-327P-201ENST00000516270 127 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 RN7SKP82-201ENST00000516786 223 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC005832.3-201ENST00000537929 631 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS11Q9H270 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS11Q9H270 MIR3913-1-201ENST00000577744 102 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.1□□□□□ -1.59
VPS11Q9H270 MIR4310-201ENST00000582950 57 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 AL161729.3-201ENST00000603533 673 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 SUGT1P3-202ENST00000604259 383 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 AL365204.3-201ENST00000612448 685 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AC135068.12-201ENST00000637370 931 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.1□□□□□ -1.59
VPS11Q9H270 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
VPS11Q9H270 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
VPS11Q9H270 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS11Q9H270 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS11Q9H270 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS11Q9H270 ERCC6-202ENST00000374127 1782 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS11Q9H270 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS11Q9H270 AL645937.1-201ENST00000641739 1652 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS11Q9H270 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS11Q9H270 OR4K15-201ENST00000305051 1216 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS11Q9H270 RNU6-374P-201ENST00000364146 108 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 SNORA4.1-201ENST00000364263 144 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
VPS11Q9H270 Y_RNA.460-201ENST00000384255 102 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS11Q9H270 RNA5SP339-201ENST00000390987 122 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 RPS3AP23-201ENST00000401762 784 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 AL356776.1-201ENST00000406574 447 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 RNU6-248P-201ENST00000410720 107 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 AC007390.1-201ENST00000415722 356 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS11Q9H270 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS11Q9H270 AL138785.1-201ENST00000425821 331 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 AC234779.1-201ENST00000425910 285 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 ELOCP14-201ENST00000428070 331 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 ZYG11AP1-201ENST00000430329 837 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 ELOCP7-201ENST00000439968 331 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 PMCHL2-203ENST00000457791 237 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 AL133445.1-201ENST00000467051 452 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 RPS29P25-201ENST00000481709 171 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 AC020890.1-201ENST00000491837 504 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS11Q9H270 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS11Q9H270 RNU6-1045P-201ENST00000516321 107 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS11Q9H270 AP002453.2-201ENST00000533503 320 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS11Q9H270 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS11Q9H270 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS11Q9H270 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS11Q9H270 AC233702.9-201ENST00000581528 203 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS11Q9H270 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS11Q9H270 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS11Q9H270 AC009220.3-201ENST00000604318 586 ntBASIC5.09□□□□□ -1.59
VPS11Q9H270 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS11Q9H270 AL445264.1-201ENST00000621719 171 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms