Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC105402.2-201ENST00000438503 358 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 CALM1P2-201ENST00000452941 448 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 HMGN1P18-201ENST00000457642 277 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 LARP7P4-201ENST00000481075 878 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 RPL23AP73-201ENST00000492507 471 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 RNA5SP164-201ENST00000516533 110 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 AP006245.1-201ENST00000522549 120 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 AC011611.1-201ENST00000552179 197 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 AC012493.2-201ENST00000595083 291 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 AC091488.1-201ENST00000604239 660 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 AC016252.1-201ENST00000609721 474 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 AL450472.3-201ENST00000615578 367 ntBASIC3.47□□□□□ -1.85
TRIM4Q9C037 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.47□□□□□ -1.85
TRIM4Q9C037 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.47□□□□□ -1.85
TRIM4Q9C037 DCAF13P3-201ENST00000561147 1334 ntBASIC3.46□□□□□ -1.85
TRIM4Q9C037 AL355578.1-201ENST00000607405 1328 ntBASIC3.46□□□□□ -1.85
TRIM4Q9C037 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
TRIM4Q9C037 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM4Q9C037 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 SAGE2P-201ENST00000420011 2126 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TRIM4Q9C037 RNA5SP295-201ENST00000362655 121 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 UBA52P6-201ENST00000399822 382 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 GSTA12P-201ENST00000402398 508 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 RN7SKP123-201ENST00000410732 291 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 ATP5A1P2-201ENST00000412323 255 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 SMC4P1-201ENST00000414479 527 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 HMGB3P23-201ENST00000414981 585 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 HMGB3P20-201ENST00000417997 600 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 SDCBPP2-201ENST00000424643 885 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AL160175.1-201ENST00000428124 247 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC008065.1-201ENST00000428525 348 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC093716.1-201ENST00000435923 377 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC073387.1-201ENST00000453261 709 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC114982.2-201ENST00000461396 358 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 SNORA70.17-201ENST00000516449 133 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC087888.1-201ENST00000550884 1254 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 LARP7P3-201ENST00000579888 337 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC010591.1-201ENST00000603941 649 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC016877.3-201ENST00000606778 504 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC145207.9-201ENST00000623802 325 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 XPOTP1-201ENST00000443317 2398 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC110774.1-201ENST00000623567 2018 ntBASIC3.46□□□□□ -1.86
TRIM4Q9C037 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
TRIM4Q9C037 AC017002.4-201ENST00000604721 1525 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM4Q9C037 SNORD56.3-201ENST00000363507 71 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TRIM4Q9C037 RPL31P52-201ENST00000407532 367 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 MTND2P16-201ENST00000419987 799 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 COTL1P1-201ENST00000422309 375 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 AC005300.1-201ENST00000428401 373 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 AL671855.1-201ENST00000446875 1203 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 AC006483.1-201ENST00000487308 313 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 AC245166.1-201ENST00000521012 253 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 AC023161.2-201ENST00000551218 780 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 MIR5187-201ENST00000583479 76 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 MTCO3P22-201ENST00000603219 784 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 AL355365.1-201ENST00000616480 294 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 AL359757.2-201ENST00000624309 274 ntBASIC3.45□□□□□ -1.86
TRIM4Q9C037 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.45□□□□□ -1.86
TRIM4Q9C037 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM4Q9C037 AC007656.2-201ENST00000624902 4547 ntBASIC3.44□□□□□ -1.86
TRIM4Q9C037 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TRIM4Q9C037 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms