Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 U1.39-201ENST00000621562 146 ntBASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
UPF3BQ9BZI7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 RPL7P26-201ENST00000333817 754 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 SKINT1L-201ENST00000401057 817 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 RNA5SP229-201ENST00000410809 99 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 GTF2IP23-201ENST00000423746 351 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AC005326.1-201ENST00000429197 123 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 ISCA1P2-201ENST00000438679 421 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 RN7SL429P-201ENST00000479090 223 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 RPS3AP14-201ENST00000483907 780 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 RN7SL489P-201ENST00000486185 223 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 RPL7P38-201ENST00000488396 739 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 RN7SL327P-201ENST00000488659 223 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AC023050.1-201ENST00000498198 304 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 MIR4458-201ENST00000578872 75 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AC012493.2-201ENST00000595083 291 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AC011492.1-201ENST00000600023 315 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AL162713.1-201ENST00000604480 262 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 RN7SL853P-201ENST00000617250 223 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AL133370.2-201ENST00000619934 439 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 AL356321.1-201ENST00000621360 228 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 SYT14P1-202ENST00000600441 1448 ntBASIC3.92□□□□□ -1.78
UPF3BQ9BZI7 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 SNORD56.3-201ENST00000363507 71 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 MIR320B1-201ENST00000390209 79 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 BX890604.2-201ENST00000427883 474 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 UBE2V1P1-201ENST00000430836 445 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 AL353093.1-201ENST00000441292 436 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 ATP5C1P1-201ENST00000441945 895 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 RPS4XP10-201ENST00000465034 731 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 AC011037.1-201ENST00000483964 558 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 RPL21P13-201ENST00000488305 481 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 AC093663.1-201ENST00000497190 394 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 SNORA64.4-201ENST00000516632 81 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 MIR5186-201ENST00000577504 120 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 AC006254.3-201ENST00000603353 884 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 uc_338.1-201ENST00000612113 180 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 AC139769.3-201ENST00000618383 175 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 SNORD39.4-201ENST00000620099 78 ntBASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.78
UPF3BQ9BZI7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
UPF3BQ9BZI7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
UPF3BQ9BZI7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.9□□□□□ -1.78
UPF3BQ9BZI7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
UPF3BQ9BZI7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.9□□□□□ -1.78
UPF3BQ9BZI7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
UPF3BQ9BZI7 MTCO3P31-201ENST00000405526 789 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 RPS15AP6-201ENST00000420703 385 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 AL049610.1-201ENST00000423374 372 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 AL160175.1-201ENST00000428124 247 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 CST9LP2-201ENST00000437612 320 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 AC021678.1-201ENST00000505195 936 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms