Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC015908.1-201ENST00000478739 476 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 RNU6-889P-201ENST00000517189 103 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 MIMT1-201ENST00000597105 1050 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 BMS1P7-201ENST00000602440 1052 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC092354.2-201ENST00000607786 514 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 XIST_intron.1-201ENST00000619444 68 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC091953.5-201ENST00000622919 233 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 AC110801.1-201ENST00000623590 212 ntBASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RSPO3Q9BXY4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AL356057.1-202ENST00000402263 756 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 RPL31P45-201ENST00000419532 356 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 MORF4L1P7-201ENST00000426038 703 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 UBE2V1P6-201ENST00000430840 422 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 VN1R48P-201ENST00000448149 1036 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 RAB28P3-201ENST00000448325 597 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 SNORD105B-201ENST00000458770 79 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 CYCSP20-201ENST00000473154 315 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 RPL21P13-201ENST00000488305 481 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 MTND3P24-201ENST00000506306 329 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 HMGN1P15-201ENST00000513870 295 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 RNU2-58P-201ENST00000516403 183 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 SNORA70.24-201ENST00000517233 118 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AC103843.2-201ENST00000530523 682 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 PDCL2P2-201ENST00000533651 189 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AC007458.1-201ENST00000542812 373 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AC093014.1-201ENST00000548926 724 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 CR383656.14-201ENST00000551951 406 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AC022146.1-201ENST00000595307 847 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AC006254.3-201ENST00000603353 884 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AL671309.1-201ENST00000603750 544 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 BNIP3P11-201ENST00000603878 563 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AC009948.4-201ENST00000604692 675 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AC144521.1-201ENST00000607148 956 ntBASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RSPO3Q9BXY4 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 CR383658.2-201ENST00000547576 1525 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 SNORD51.1-201ENST00000365405 77 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 MTCO3P31-201ENST00000405526 789 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 PTGES3P2-201ENST00000407942 482 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 RN7SKP111-201ENST00000410349 271 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 LIPT1P1-201ENST00000415870 1186 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 RNF19BPX-201ENST00000426224 625 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 BX890604.2-201ENST00000427883 474 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC093716.1-201ENST00000435923 377 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 HMGB3P11-201ENST00000440127 604 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 ATP5C1P1-201ENST00000441945 895 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC245517.2-201ENST00000442890 346 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AC008264.1-201ENST00000447612 367 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 RPL26P28-201ENST00000451325 435 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 AP002345.1-201ENST00000456493 928 ntBASIC3.1□□□□□ -1.91
RSPO3Q9BXY4 MTND2P30-201ENST00000456663 382 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms