Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HMGB3P11-201ENST00000440127 604 ntBASIC3.9□□□□□ -1.79
ABCA3Q99758 ANXA2P1-201ENST00000505539 926 ntBASIC3.9□□□□□ -1.79
ABCA3Q99758 MIR2276-201ENST00000516886 89 ntBASIC3.9□□□□□ -1.79
ABCA3Q99758 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.9□□□□□ -1.79
ABCA3Q99758 AC007566.2-201ENST00000603642 413 ntBASIC3.9□□□□□ -1.79
ABCA3Q99758 RMST_9.1-201ENST00000619945 193 ntBASIC3.9□□□□□ -1.79
ABCA3Q99758 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ABCA3Q99758 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ABCA3Q99758 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.89□□□□□ -1.79
ABCA3Q99758 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.89□□□□□ -1.79
ABCA3Q99758 RANP4-201ENST00000413361 655 ntBASIC3.89□□□□□ -1.79
ABCA3Q99758 AC111000.2-201ENST00000507775 550 ntBASIC3.89□□□□□ -1.79
ABCA3Q99758 SNORA31.21-201ENST00000517180 77 ntBASIC3.89□□□□□ -1.79
ABCA3Q99758 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.89□□□□□ -1.79
ABCA3Q99758 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.89□□□□□ -1.79
ABCA3Q99758 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.89□□□□□ -1.79
ABCA3Q99758 AC079089.3-201ENST00000603094 673 ntBASIC3.89□□□□□ -1.79
ABCA3Q99758 AC026790.2-201ENST00000606282 430 ntBASIC3.89□□□□□ -1.79
ABCA3Q99758 AP001005.3-201ENST00000622049 129 ntBASIC3.89□□□□□ -1.79
ABCA3Q99758 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.89□□□□□ -1.79
ABCA3Q99758 AC046144.1-201ENST00000478559 1853 ntBASIC3.89□□□□□ -1.79
ABCA3Q99758 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
ABCA3Q99758 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.88□□□□□ -1.79
ABCA3Q99758 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.88□□□□□ -1.79
ABCA3Q99758 AC015813.6-201ENST00000624409 5808 ntBASIC3.88□□□□□ -1.79
ABCA3Q99758 SNORA79B-201ENST00000410557 148 ntBASIC3.88□□□□□ -1.79
ABCA3Q99758 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.88□□□□□ -1.79
ABCA3Q99758 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.88□□□□□ -1.79
ABCA3Q99758 AP000936.2-201ENST00000447151 681 ntBASIC3.88□□□□□ -1.79
ABCA3Q99758 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.88□□□□□ -1.79
ABCA3Q99758 AC008549.1-201ENST00000512900 643 ntBASIC3.88□□□□□ -1.79
ABCA3Q99758 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.88□□□□□ -1.79
ABCA3Q99758 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.88□□□□□ -1.79
ABCA3Q99758 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ABCA3Q99758 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ABCA3Q99758 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ABCA3Q99758 DDX18P3-201ENST00000404856 2007 ntBASIC3.88□□□□□ -1.79
ABCA3Q99758 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
ABCA3Q99758 GCNT6-201ENST00000379591 934 ntBASIC3.87□□□□□ -1.79
ABCA3Q99758 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.87□□□□□ -1.79
ABCA3Q99758 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.87□□□□□ -1.79
ABCA3Q99758 RPS12P5-201ENST00000423449 371 ntBASIC3.87□□□□□ -1.79
ABCA3Q99758 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.87□□□□□ -1.79
ABCA3Q99758 NECAP1P2-201ENST00000455668 727 ntBASIC3.87□□□□□ -1.79
ABCA3Q99758 snoU13.26-201ENST00000459452 105 ntBASIC3.87□□□□□ -1.79
ABCA3Q99758 SRIP1-201ENST00000489235 288 ntBASIC3.87□□□□□ -1.79
ABCA3Q99758 RNA5SP24-201ENST00000516478 95 ntBASIC3.87□□□□□ -1.79
ABCA3Q99758 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.87□□□□□ -1.79
ABCA3Q99758 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ABCA3Q99758 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
ABCA3Q99758 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.87□□□□□ -1.79
ABCA3Q99758 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ABCA3Q99758 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
ABCA3Q99758 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
ABCA3Q99758 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.87□□□□□ -1.79
ABCA3Q99758 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.87□□□□□ -1.79
ABCA3Q99758 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.87□□□□□ -1.79
ABCA3Q99758 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.87□□□□□ -1.79
ABCA3Q99758 RNU6-84P-201ENST00000607737 102 ntBASIC3.87□□□□□ -1.79
ABCA3Q99758 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.87□□□□□ -1.79
ABCA3Q99758 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.87□□□□□ -1.79
ABCA3Q99758 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ABCA3Q99758 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ABCA3Q99758 ZNF658B-202ENST00000615961 3375 ntBASIC3.86□□□□□ -1.79
ABCA3Q99758 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
ABCA3Q99758 RNA5SP247-201ENST00000411181 105 ntBASIC3.86□□□□□ -1.79
ABCA3Q99758 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.86□□□□□ -1.79
ABCA3Q99758 AC099063.2-201ENST00000446360 662 ntBASIC3.86□□□□□ -1.79
ABCA3Q99758 AL121877.1-201ENST00000453704 622 ntBASIC3.86□□□□□ -1.79
ABCA3Q99758 AC117522.3-201ENST00000507974 584 ntBASIC3.86□□□□□ -1.79
ABCA3Q99758 RNA5SP217-201ENST00000515959 91 ntBASIC3.86□□□□□ -1.79
ABCA3Q99758 ATP5F1P5-201ENST00000526403 760 ntBASIC3.86□□□□□ -1.79
ABCA3Q99758 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
ABCA3Q99758 HSPA8P1-201ENST00000425843 1833 ntBASIC3.86□□□□□ -1.79
ABCA3Q99758 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.86□□□□□ -1.79
ABCA3Q99758 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC3.86□□□□□ -1.79
ABCA3Q99758 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ABCA3Q99758 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.86□□□□□ -1.79
ABCA3Q99758 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.86□□□□□ -1.79
ABCA3Q99758 AC010733.2-201ENST00000589496 5702 ntBASIC3.86□□□□□ -1.79
ABCA3Q99758 RNA5SP289-201ENST00000362332 137 ntBASIC3.85□□□□□ -1.79
ABCA3Q99758 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ABCA3Q99758 BX679664.1-201ENST00000434429 253 ntBASIC3.85□□□□□ -1.79
ABCA3Q99758 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.85□□□□□ -1.79
ABCA3Q99758 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.85□□□□□ -1.79
ABCA3Q99758 AC007954.1-201ENST00000554198 494 ntBASIC3.85□□□□□ -1.79
ABCA3Q99758 SERPINE4P-201ENST00000554978 281 ntBASIC3.85□□□□□ -1.79
ABCA3Q99758 AC007318.2-201ENST00000620999 243 ntBASIC3.85□□□□□ -1.79
ABCA3Q99758 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
ABCA3Q99758 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ABCA3Q99758 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ABCA3Q99758 AC087190.4-201ENST00000574616 8334 ntBASIC3.85□□□□□ -1.79
ABCA3Q99758 AL365361.1-201ENST00000566942 3481 ntBASIC3.85□□□□□ -1.79
ABCA3Q99758 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ABCA3Q99758 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ABCA3Q99758 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
ABCA3Q99758 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.84□□□□□ -1.79
ABCA3Q99758 AL360182.1-201ENST00000397433 468 ntBASIC3.84□□□□□ -1.79
ABCA3Q99758 AL512430.2-201ENST00000406786 339 ntBASIC3.84□□□□□ -1.79
ABCA3Q99758 FTH1P6-201ENST00000430768 320 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms