Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RPS4XP15-201ENST00000489210 795 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 RPL30P11-201ENST00000495304 339 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC008802.1-201ENST00000519121 791 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC069240.1-201ENST00000548774 375 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC137768.1-201ENST00000549998 553 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AL389895.1-201ENST00000554127 252 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC079075.1-201ENST00000559543 878 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 KARSP3-201ENST00000571212 1504 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 MIR4458-201ENST00000578872 75 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 MIR4330-201ENST00000579077 105 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC107982.3-201ENST00000584957 985 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC083899.3-201ENST00000603413 594 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC010857.1-201ENST00000606398 594 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 OR6R2P-201ENST00000609216 300 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 MIR6748-201ENST00000610433 71 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 MIR6798-201ENST00000612887 67 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AL133243.1-201ENST00000614487 366 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 MIR7844-201ENST00000616161 122 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 MIR7154-201ENST00000620673 73 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC009878.1-201ENST00000621819 340 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 AL356596.1-201ENST00000624230 379 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 AC084035.1-201ENST00000634543 607 ntBASIC4.59□□□□□ -1.67
VPS50Q96JG6 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VPS50Q96JG6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VPS50Q96JG6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
VPS50Q96JG6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 ZNF37BP-203ENST00000452306 1352 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VPS50Q96JG6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 RNA5SP88-201ENST00000365560 109 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 OR5H15-201ENST00000383696 930 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 RNU6-1293P-201ENST00000384077 107 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 SNRPEP2-201ENST00000397592 279 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 RPS3AP23-201ENST00000401762 784 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 RPL23AP48-201ENST00000406913 488 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 U3.35-201ENST00000408405 208 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 RN7SKP216-201ENST00000411050 312 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 RN7SKP100-201ENST00000411258 284 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 VDAC1P9-201ENST00000412766 841 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS50Q96JG6 RPL23AP39-201ENST00000415533 405 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC004552.1-201ENST00000419089 348 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 MTCO2P34-201ENST00000421994 607 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 RPL30P3-201ENST00000424262 333 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 MTND1P34-201ENST00000438556 671 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 TDGF1P1-201ENST00000445734 527 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 ELOCP30-201ENST00000447108 299 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 RPL26P28-201ENST00000451325 435 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AL513533.1-201ENST00000453728 415 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 RPS26P3-201ENST00000470205 348 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 RN7SL738P-201ENST00000470264 297 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 RPS26P28-201ENST00000470806 348 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC090543.2-201ENST00000483963 348 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC004057.1-201ENST00000485827 348 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 MTCO2P32-201ENST00000514865 403 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 RNU1-6P-201ENST00000516290 144 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 DEFB131D-201ENST00000526803 184 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC022880.1-201ENST00000534017 973 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 CYCSP28-201ENST00000534284 321 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 RFPL1S-203ENST00000539579 330 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 OR6C7P-201ENST00000547875 934 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 CYCSP2-201ENST00000558168 301 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS50Q96JG6 SNORA74C-1-201ENST00000580726 201 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 HMGB2P1-201ENST00000591146 634 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC234771.5-201ENST00000600161 514 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC008638.3-201ENST00000603341 463 ntBASIC4.58□□□□□ -1.68
VPS50Q96JG6 AC004987.4-201ENST00000603383 338 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms