Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SNORD42A-201ENST00000459584 64 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC010683.1-201ENST00000473673 378 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 NIP7P2-201ENST00000485801 544 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC096751.1-202ENST00000502691 1067 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 TMEM251P1-201ENST00000503717 318 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 OR7H2P-201ENST00000513483 306 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 MTND4LP18-201ENST00000526864 291 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AL110118.1-201ENST00000553543 400 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC136619.2-201ENST00000563361 631 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AL133457.1-201ENST00000564251 987 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 MIR4528-201ENST00000577763 90 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC091042.1-201ENST00000579213 173 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 BNIP3P8-201ENST00000597863 560 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC015871.2-201ENST00000603605 948 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC093765.1-201ENST00000603758 881 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC005191.1-201ENST00000603950 358 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC006566.1-201ENST00000608943 513 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC138749.5-201ENST00000611461 208 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AL160394.1-201ENST00000624765 724 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AL731566.1-201ENST00000620490 1937 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 GDI2P1-201ENST00000429312 1336 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 AC097504.1-201ENST00000515103 2415 ntBASIC4.4□□□□□ -1.71
CTHRC1Q96CG8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AL451142.2-201ENST00000429076 2090 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 RNU6-348P-201ENST00000384386 107 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 Y_RNA.516-201ENST00000384541 124 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 RPL37P18-201ENST00000411602 243 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC069218.2-201ENST00000411665 344 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 HMGN1P14-201ENST00000412459 517 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 OR8G2P-201ENST00000412796 908 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 FABP7P2-201ENST00000429946 379 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 USP9YP12-201ENST00000450481 570 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 EIF4A1P11-201ENST00000451239 222 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AL445433.1-201ENST00000457507 257 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 CYCSP34-201ENST00000458172 304 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 OR9M1P-201ENST00000459641 921 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 RPS29P22-201ENST00000472363 168 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 LARP1BP2-201ENST00000486594 519 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC011005.3-201ENST00000491624 395 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC022447.3-201ENST00000506865 495 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC024589.1-201ENST00000512207 263 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC011352.1-201ENST00000512300 793 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC104057.1-201ENST00000515547 497 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 PAICSP4-201ENST00000517543 1253 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 HMGB1P19-201ENST00000517578 577 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC104986.1-201ENST00000517978 436 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AP001180.3-201ENST00000582221 145 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC090186.1-201ENST00000605991 572 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC026368.1-201ENST00000614934 690 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 AC099654.12-201ENST00000639868 649 ntBASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CTHRC1Q96CG8 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms