Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 AC037471.2-201ENST00000564941 598 ntBASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 AC007599.1-201ENST00000568688 1174 ntBASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 AC074051.3-201ENST00000570238 358 ntBASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 AC105227.2-201ENST00000615075 605 ntBASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 RMST_9.1-201ENST00000619945 193 ntBASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 MTCO1P12-201ENST00000414273 1543 ntBASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 ZNF734P-201ENST00000419494 1534 ntBASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 AL592494.2-201ENST00000425455 1548 ntBASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HDDC3Q8N4P3 ZNF849P-201ENST00000594711 1566 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 SFR1P1-201ENST00000403720 688 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 SNORA3C-201ENST00000408792 125 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 RNU2-72P-201ENST00000411175 163 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 RNA5SP39-201ENST00000411245 120 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 OR51A3P-201ENST00000413596 924 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC233981.1-201ENST00000423224 461 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 RANP8-201ENST00000444720 713 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 EXTL2P1-201ENST00000446218 416 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 HMGN2P7-201ENST00000456186 273 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 PLGLA-201ENST00000465668 449 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 RPL31P13-201ENST00000484151 370 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC074250.1-201ENST00000511117 192 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 MTND2P31-201ENST00000512602 616 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 OR4A12P-201ENST00000530847 918 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 CYP2C60P-201ENST00000566088 139 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AP002906.1-201ENST00000603405 233 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC113368.1-201ENST00000603736 382 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC092354.2-201ENST00000607786 514 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC013468.1-201ENST00000608680 598 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC073592.7-201ENST00000623659 507 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC073530.2-201ENST00000623987 261 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 AC020923.1-201ENST00000624021 917 ntBASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDDC3Q8N4P3 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 AF127577.6-201ENST00000623352 2191 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 SNORA51.2-201ENST00000364595 132 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 Y_RNA.493-201ENST00000384422 102 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 AL138880.1-201ENST00000405824 642 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 ZNF602P-201ENST00000405929 924 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 PRDX3P3-201ENST00000447765 522 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 ANP32BP2-201ENST00000454525 545 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 CDC42P1-201ENST00000456658 548 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 HMGB1P38-201ENST00000490557 577 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 AC068305.1-201ENST00000497406 726 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 RNU6-334P-201ENST00000517072 102 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 IGKV2-38-201ENST00000517443 247 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 AP001207.1-201ENST00000524051 481 ntBASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.92□□□□□ -1.78
HDDC3Q8N4P3 MIR4789-201ENST00000577469 82 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms