Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN4BQ8IWT1 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN4BQ8IWT1 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.5□□□□□ -1.69
SCN4BQ8IWT1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN4BQ8IWT1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.5□□□□□ -1.69
SCN4BQ8IWT1 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 RNU6-984P-201ENST00000363236 109 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 RNA5SP28-201ENST00000363841 119 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 SNORD66.1-201ENST00000391230 76 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AL022722.2-201ENST00000402519 180 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 RN7SKP182-201ENST00000410772 298 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 TIMM9P2-201ENST00000419324 266 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AL022400.1-201ENST00000423946 935 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 BTF3P10-201ENST00000433415 495 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 RPS25P9-201ENST00000435591 252 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 KATNBL1P3-201ENST00000443475 909 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 BZW1P2-201ENST00000473537 826 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 RPS29P19-201ENST00000479709 171 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC012158.1-204ENST00000483430 465 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AF213884.1-201ENST00000488102 463 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 RNA5SP73-201ENST00000516744 108 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 RNU6-232P-201ENST00000517144 64 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 SLC2A13P1-201ENST00000531560 322 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC124068.1-201ENST00000563131 678 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 DUXAP11-201ENST00000603858 526 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC112220.3-201ENST00000605502 502 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC006270.3-201ENST00000605967 1036 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC091946.2-201ENST00000606105 291 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC245297.2-201ENST00000610119 565 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AL138721.1-201ENST00000616756 179 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 LINC00901.1-201ENST00000617252 152 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AL136981.2-201ENST00000617319 734 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AL607023.1-201ENST00000620045 248 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 AC120349.2-201ENST00000625002 298 ntBASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN4BQ8IWT1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 AL592182.3-201ENST00000642132 3304 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 AL391994.1-201ENST00000254724 282 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 RNU1-94P-201ENST00000362627 173 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 RNU6-1279P-201ENST00000383917 103 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 RNU6-1200P-201ENST00000384162 107 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 MIR506-201ENST00000384998 124 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 MIR195-201ENST00000385194 87 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 SKINT1L-201ENST00000401057 817 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 RPS15AP40-201ENST00000419621 391 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 AL445567.1-201ENST00000439121 144 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 AC013828.1-201ENST00000481845 158 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 RPL7P38-201ENST00000488396 739 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 AC147055.4-201ENST00000504399 745 ntBASIC4.48□□□□□ -1.69
SCN4BQ8IWT1 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms