Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC092354.2-201ENST00000607786 514 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC116165.2-201ENST00000616705 206 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC008443.7-201ENST00000622195 246 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC027514.1-201ENST00000588561 1603 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC009951.1-201ENST00000623674 2614 ntBASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SLC44A4Q53GD3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 RN7SKP224-201ENST00000364140 325 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 SNORA48.7-201ENST00000391302 135 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 RN7SKP267-201ENST00000410381 285 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 RNA5SP146-201ENST00000410743 123 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 TPMTP3-201ENST00000411928 735 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 RPL7P8-201ENST00000411964 730 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 MTCYBP38-201ENST00000417160 1123 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 LINC00993-201ENST00000420453 540 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AL645608.4-201ENST00000423619 154 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC244035.1-201ENST00000430042 390 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC122718.1-201ENST00000439448 744 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 CBX1P1-201ENST00000440184 427 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC108463.1-201ENST00000450258 347 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 HMGN3P1-201ENST00000453847 193 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 RPS17P2-201ENST00000461663 408 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 FAM133DP-201ENST00000464802 691 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC092757.1-201ENST00000467293 467 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC021146.3-201ENST00000511911 260 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC060788.1-201ENST00000521318 469 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AP001781.1-201ENST00000530977 207 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC107918.3-201ENST00000533272 382 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC092851.1-201ENST00000535964 478 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AL389895.1-201ENST00000554127 252 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC006362.1-201ENST00000567392 174 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC073648.5-201ENST00000603502 305 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AL391497.1-201ENST00000608671 547 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AL356266.1-201ENST00000623311 483 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC079228.1-201ENST00000624774 1049 ntBASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SLC44A4Q53GD3 AC009229.4-201ENST00000623854 1947 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC092435.4-201ENST00000623012 4159 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC010300.1-201ENST00000600671 5134 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 RAD17P1-201ENST00000418130 2042 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC117529.2-201ENST00000512159 2068 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 Y_RNA.302-201ENST00000364997 102 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 RNU6-517P-201ENST00000384362 110 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 MIR506-201ENST00000384998 124 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 OR6C69P-201ENST00000394268 893 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC140479.3-201ENST00000418944 1126 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC093698.1-201ENST00000423843 571 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 RPS27AP12-201ENST00000429552 465 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 RPS17P8-201ENST00000434525 335 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 CEACAMP1-201ENST00000434624 1035 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC092427.1-201ENST00000439177 601 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 MTND4P18-201ENST00000447010 465 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 MTCO1P48-201ENST00000448024 1096 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 BTF3P6-201ENST00000448054 499 ntBASIC4.87□□□□□ -1.63
SLC44A4Q53GD3 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms