Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.75□□□□□ -1.81
RFX7Q2KHR2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX7Q2KHR2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX7Q2KHR2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.75□□□□□ -1.81
RFX7Q2KHR2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.74□□□□□ -1.81
RFX7Q2KHR2 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RFX7Q2KHR2 FAM35BP-202ENST00000497389 3337 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RFX7Q2KHR2 OR5H2-201ENST00000355273 945 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RFX7Q2KHR2 SNORA46-201ENST00000384762 135 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 RPL5P18-201ENST00000406671 891 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 USP9YP36-201ENST00000424581 829 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 AC008065.1-201ENST00000428525 348 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 USP9YP31-201ENST00000431405 881 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 AC245517.2-201ENST00000442890 346 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 RPS27P29-201ENST00000463110 252 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 AC010374.2-201ENST00000512933 535 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 AC068657.1-201ENST00000520807 306 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 AC245166.1-201ENST00000521012 253 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.74□□□□□ -1.81
RFX7Q2KHR2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.74□□□□□ -1.81
RFX7Q2KHR2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.74□□□□□ -1.81
RFX7Q2KHR2 MTCO3P22-201ENST00000603219 784 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 AC123786.2-201ENST00000603459 275 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 PRELID3BP8-201ENST00000604148 295 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 AC099506.2-201ENST00000623074 221 ntBASIC3.74□□□□□ -1.81
RFX7Q2KHR2 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.74□□□□□ -1.81
RFX7Q2KHR2 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RFX7Q2KHR2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
RFX7Q2KHR2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RFX7Q2KHR2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AC107081.3-201ENST00000612715 2034 ntBASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AC025750.2-201ENST00000442609 450 ntBASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 CCRL1P1-201ENST00000449542 1053 ntBASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AC093278.1-201ENST00000494700 600 ntBASIC3.73□□□□□ -1.81
RFX7Q2KHR2 NIPA2P2-201ENST00000496376 1083 ntBASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AC083899.3-201ENST00000603413 594 ntBASIC3.73□□□□□ -1.81
RFX7Q2KHR2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RFX7Q2KHR2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFX7Q2KHR2 AL592494.2-201ENST00000425455 1548 ntBASIC3.72□□□□□ -1.81
RFX7Q2KHR2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RFX7Q2KHR2 RN7SKP220-201ENST00000410611 288 ntBASIC3.72□□□□□ -1.81
RFX7Q2KHR2 RNU6-603P-201ENST00000411403 107 ntBASIC3.72□□□□□ -1.81
RFX7Q2KHR2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.72□□□□□ -1.81
RFX7Q2KHR2 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.72□□□□□ -1.81
RFX7Q2KHR2 AL354710.1-201ENST00000453641 246 ntBASIC3.72□□□□□ -1.81
RFX7Q2KHR2 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.72□□□□□ -1.81
RFX7Q2KHR2 HIGD1AP3-201ENST00000515857 278 ntBASIC3.72□□□□□ -1.81
RFX7Q2KHR2 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.72□□□□□ -1.81
RFX7Q2KHR2 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.72□□□□□ -1.81
RFX7Q2KHR2 AC006504.3-201ENST00000586818 523 ntBASIC3.72□□□□□ -1.81
RFX7Q2KHR2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RFX7Q2KHR2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
RFX7Q2KHR2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.71□□□□□ -1.82
RFX7Q2KHR2 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.71□□□□□ -1.82
RFX7Q2KHR2 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFX7Q2KHR2 SNORD67-201ENST00000390833 111 ntBASIC3.71□□□□□ -1.82
RFX7Q2KHR2 AL031121.1-201ENST00000406553 254 ntBASIC3.71□□□□□ -1.82
RFX7Q2KHR2 VN1R51P-201ENST00000411675 945 ntBASIC3.71□□□□□ -1.82
RFX7Q2KHR2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX7Q2KHR2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.71□□□□□ -1.82
RFX7Q2KHR2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.71□□□□□ -1.82
RFX7Q2KHR2 AL035551.1-201ENST00000446931 348 ntBASIC3.71□□□□□ -1.82
RFX7Q2KHR2 UQCRHP3-201ENST00000451503 251 ntBASIC3.71□□□□□ -1.82
RFX7Q2KHR2 PRDX3P4-201ENST00000470828 747 ntBASIC3.71□□□□□ -1.82
RFX7Q2KHR2 AC087385.1-201ENST00000475062 312 ntBASIC3.71□□□□□ -1.82
RFX7Q2KHR2 KCTD9P5-201ENST00000504141 1170 ntBASIC3.71□□□□□ -1.82
RFX7Q2KHR2 AC114967.1-201ENST00000504890 259 ntBASIC3.71□□□□□ -1.82
RFX7Q2KHR2 AP002404.1-201ENST00000532005 451 ntBASIC3.71□□□□□ -1.82
RFX7Q2KHR2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.71□□□□□ -1.82
RFX7Q2KHR2 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.71□□□□□ -1.82
RFX7Q2KHR2 C2orf27A-204ENST00000623058 969 ntBASIC3.71□□□□□ -1.82
RFX7Q2KHR2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RFX7Q2KHR2 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RFX7Q2KHR2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.71□□□□□ -1.82
RFX7Q2KHR2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.7□□□□□ -1.82
RFX7Q2KHR2 OR5BR1P-201ENST00000524992 1330 ntBASIC3.7□□□□□ -1.82
RFX7Q2KHR2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.7□□□□□ -1.82
RFX7Q2KHR2 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RFX7Q2KHR2 RPL35AP12-201ENST00000425362 338 ntBASIC3.7□□□□□ -1.82
RFX7Q2KHR2 AC117440.1-201ENST00000474107 571 ntBASIC3.7□□□□□ -1.82
RFX7Q2KHR2 RN7SL20P-201ENST00000488827 297 ntBASIC3.7□□□□□ -1.82
RFX7Q2KHR2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.7□□□□□ -1.82
RFX7Q2KHR2 RNA5SP309-201ENST00000516670 106 ntBASIC3.7□□□□□ -1.82
RFX7Q2KHR2 AP001486.2-201ENST00000561652 5113 ntBASIC3.7□□□□□ -1.82
RFX7Q2KHR2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms