Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 AC108120.2-201ENST00000512973 294 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 MIR2114-201ENST00000516645 80 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.5□□□□□ -1.69
PTCH1Q13635 AC104763.2-201ENST00000604179 382 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 BNIP3P10-201ENST00000605360 577 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.5□□□□□ -1.69
PTCH1Q13635 TUG1_1.1-201ENST00000610654 145 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 uc_338.25-201ENST00000613756 156 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCH1Q13635 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.5□□□□□ -1.69
PTCH1Q13635 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PTCH1Q13635 SAGE4P-201ENST00000442271 3381 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
PTCH1Q13635 AC007342.9-201ENST00000623877 1385 ntBASIC4.5□□□□□ -1.69
PTCH1Q13635 OR5BR1P-201ENST00000524992 1330 ntBASIC4.49□□□□□ -1.69
PTCH1Q13635 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
PTCH1Q13635 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCH1Q13635 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PTCH1Q13635 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCH1Q13635 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCH1Q13635 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCH1Q13635 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.49□□□□□ -1.69
PTCH1Q13635 AC087312.1-201ENST00000471411 480 ntBASIC4.49□□□□□ -1.69
PTCH1Q13635 AC005912.1-201ENST00000495392 255 ntBASIC4.49□□□□□ -1.69
PTCH1Q13635 HMGB1P47-201ENST00000511281 589 ntBASIC4.49□□□□□ -1.69
PTCH1Q13635 RNU6-237P-201ENST00000515985 71 ntBASIC4.49□□□□□ -1.69
PTCH1Q13635 PDCD5P1-201ENST00000543528 309 ntBASIC4.49□□□□□ -1.69
PTCH1Q13635 LYZ-203ENST00000549690 669 ntTSL 2 BASIC4.49□□□□□ -1.69
PTCH1Q13635 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCH1Q13635 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.49□□□□□ -1.69
PTCH1Q13635 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
PTCH1Q13635 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
PTCH1Q13635 AL359693.1-201ENST00000614959 2407 ntBASIC4.48□□□□□ -1.69
PTCH1Q13635 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
PTCH1Q13635 MIR421-201ENST00000365696 85 ntBASIC4.48□□□□□ -1.69
PTCH1Q13635 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCH1Q13635 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.48□□□□□ -1.69
PTCH1Q13635 AC126124.2-201ENST00000413542 321 ntBASIC4.48□□□□□ -1.69
PTCH1Q13635 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.48□□□□□ -1.69
PTCH1Q13635 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.48□□□□□ -1.69
PTCH1Q13635 RPL23AP67-201ENST00000465341 474 ntBASIC4.48□□□□□ -1.69
PTCH1Q13635 RNU6-1308P-201ENST00000516817 103 ntBASIC4.48□□□□□ -1.69
PTCH1Q13635 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.48□□□□□ -1.69
PTCH1Q13635 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.48□□□□□ -1.69
PTCH1Q13635 AC008083.2-201ENST00000546707 476 ntBASIC4.48□□□□□ -1.69
PTCH1Q13635 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.48□□□□□ -1.69
PTCH1Q13635 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.48□□□□□ -1.69
PTCH1Q13635 UBL5P2-201ENST00000583788 219 ntBASIC4.48□□□□□ -1.69
PTCH1Q13635 BNIP3P38-201ENST00000601117 544 ntBASIC4.48□□□□□ -1.69
PTCH1Q13635 AL162574.2-201ENST00000614618 657 ntBASIC4.48□□□□□ -1.69
PTCH1Q13635 RIOK3P1-201ENST00000418778 1528 ntBASIC4.48□□□□□ -1.69
PTCH1Q13635 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PTCH1Q13635 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PTCH1Q13635 OR5J1P-201ENST00000313544 939 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCH1Q13635 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCH1Q13635 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCH1Q13635 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTCH1Q13635 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCH1Q13635 AC023512.1-201ENST00000444513 499 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 NPM1P13-201ENST00000452663 865 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCH1Q13635 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCH1Q13635 FABP5P6-201ENST00000510588 409 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCH1Q13635 AC103783.1-201ENST00000520506 373 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCH1Q13635 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCH1Q13635 GTF3AP2-201ENST00000557014 266 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCH1Q13635 AC015917.1-201ENST00000579654 510 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 BDH2P1-201ENST00000602288 736 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 AC007423.1-201ENST00000605009 627 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 AC135803.1-201ENST00000608748 565 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 AC068722.2-201ENST00000618734 544 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCH1Q13635 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PTCH1Q13635 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCH1Q13635 AC007390.2-201ENST00000606229 3803 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 MAPK10-373ENST00000641983 6772 ntBASIC4.47□□□□□ -1.69
PTCH1Q13635 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PTCH1Q13635 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCH1Q13635 RNU6-31P-201ENST00000384388 108 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTCH1Q13635 AL136116.1-201ENST00000403591 381 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.46□□□□□ -1.69
PTCH1Q13635 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.46□□□□□ -1.69
PTCH1Q13635 AC009965.2-201ENST00000425328 970 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 MTCO1P57-201ENST00000432182 261 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 AC009263.1-201ENST00000441193 1239 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 AP002345.1-201ENST00000456493 928 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.46□□□□□ -1.69
PTCH1Q13635 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.46□□□□□ -1.69
PTCH1Q13635 RNU6-551P-201ENST00000516661 103 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 SNORA70.19-201ENST00000516717 90 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 AC107934.2-201ENST00000518653 310 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 H3F3AP1-201ENST00000559984 334 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.46□□□□□ -1.69
PTCH1Q13635 AC015911.5-201ENST00000587076 451 ntBASIC4.46□□□□□ -1.69
PTCH1Q13635 AC112503.1-201ENST00000608436 391 ntBASIC4.46□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms